Os08g0128500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 60S ribosomal protein L37 (Fragment).
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Os08g0128500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to 60S ribosomal protein L37 (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65.91 | 0.381 | 13.6 | 1.01 | 0.743 | 0.111 | 0.369 | -2.2 | 0.15 | 18.8 | 20.2 | 4357 | -- | -- |
| 68.48 | 0.385 | 13.5 | 1.18 | 0.733 | 0.795 | 0.431 | -- | 0.237 | 18.8 | 15.5 | 13415 | -- | -- |
| 66.25 | 0.379 | 13.6 | 0.996 | 0.745 | 0.116 | -- | -2.21 | 0.149 | 18.7 | 20.28 | 4350 | -- | -- |
| 69.04 | 0.387 | 13.5 | 1.16 | 0.733 | 0.784 | -- | -- | 0.235 | 18.8 | 15.6 | 13248 | -- | -- |
| 95.17 | 0.454 | 13.5 | 1.03 | -- | 0.12 | -- | -2.07 | 0.157 | -- | 20.2 | 4156 | -- | -- |
| 76.79 | 0.411 | 13.4 | 1.67 | 0.732 | -- | 0.491 | -- | 0.375 | 18.8 | -- | -- | -- | -- |
| 77.4 | 0.412 | 13.4 | 1.67 | 0.734 | -- | -- | -- | 0.376 | 18.8 | -- | -- | -- | -- |
| 97.17 | 0.459 | 13.5 | 1.12 | -- | 0.834 | -- | -- | 0.211 | -- | 15.6 | 13536 | -- | -- |
| 76.31 | 0.407 | 13.6 | -- | 0.737 | 1.45 | -- | -- | -0.0888 | 18.7 | 16.66 | 47520 | -- | -- |
| 105.59 | 0.48 | 13.4 | 1.65 | -- | -- | -- | -- | 0.362 | -- | -- | -- | -- | -- |
| 150.48 | 0.574 | 13.5 | -- | 0.715 | -- | -- | -- | 0.191 | 18.9 | -- | -- | -- | -- |
| 104.49 | 0.476 | 13.5 | -- | -- | 1.44 | -- | -- | -0.0982 | -- | 16.65 | 47520 | -- | -- |
| 177.28 | 0.621 | 13.5 | -- | -- | -- | -- | -- | 0.179 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 63.14 | wind | 3 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 2 | 63.22 | wind | 3 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 3 | 63.75 | wind | 5 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 4 | 63.88 | wind | 1 | 14400 | < th | dose independent | rect. | 23 | 3 |
| 5 | 64.00 | wind | 1 | 14400 | > th | dose independent | rect. | 23 | 3 |
| 6 | 64.02 | humidity | 50 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 7 | 64.24 | temperature | 20 | 4320 | > th | dose independent | rect. | 16 | 9 |
| 13 | 64.40 | temperature | 20 | 4320 | < th | dose independent | rect. | 16 | 9 |
| 20 | 64.49 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 44 | 64.71 | temperature | 10 | 43200 | > th | dose independent | rect. | 10 | 5 |
| 47 | 64.73 | temperature | 20 | 4320 | > th | dose independent | sin | 16 | NA |
| 65 | 64.84 | temperature | 20 | 4320 | < th | dose independent | sin | 16 | NA |
| 101 | 65.05 | wind | 1 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 137 | 65.19 | temperature | 20 | 4320 | > th | dose independent | rect. | 16 | 2 |
| 144 | 65.21 | temperature | 20 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 152 | 65.24 | radiation | 20 | 4320 | < th | dose independent | rect. | 17 | 3 |
| 171 | 65.30 | temperature | 20 | 4320 | < th | dose independent | rect. | 16 | 3 |
| 177 | 65.32 | temperature | 15 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 221 | 65.48 | wind | 3 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 244 | 65.59 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 245 | 65.59 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 286 | 65.70 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 296 | 65.72 | radiation | 10 | 4320 | > th | dose dependent | rect. | 17 | 14 |
| 297 | 65.73 | temperature | 10 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 301 | 65.73 | temperature | 30 | 4320 | < th | dose dependent | rect. | 18 | 3 |
| 313 | 65.76 | radiation | 20 | 4320 | < th | dose independent | rect. | 17 | 8 |
| 345 | 65.83 | wind | 9 | 14400 | < th | dose independent | rect. | 22 | 6 |
| 372 | 65.89 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 383 | 65.92 | temperature | 20 | 4320 | > th | dose independent | rect. | 14 | 22 |
| 384 | 65.92 | temperature | 20 | 4320 | < th | dose independent | rect. | 14 | 22 |
| 421 | 65.97 | temperature | 20 | 4320 | > th | dose independent | rect. | 5 | 23 |
| 433 | 65.98 | temperature | 20 | 4320 | > th | dose independent | rect. | 3 | 23 |
| 440 | 65.99 | temperature | 20 | 4320 | > th | dose independent | rect. | 5 | 21 |
| 454 | 66.00 | temperature | 20 | 4320 | < th | dose independent | rect. | 5 | 23 |
| 455 | 66.01 | temperature | 20 | 4320 | > th | dose independent | no | NA | NA |
| 480 | 66.03 | temperature | 20 | 4320 | < th | dose independent | rect. | 3 | 23 |
| 482 | 66.04 | temperature | 20 | 4320 | < th | dose independent | no | NA | NA |
| 493 | 66.04 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 21 |
| 508 | 66.06 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 23 |
| 525 | 66.08 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 23 |
| 568 | 66.13 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 23 |
| 577 | 66.15 | wind | 3 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 587 | 66.15 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 23 |
| 725 | 66.38 | humidity | 60 | 43200 | > th | dose independent | rect. | 23 | 8 |
| 777 | 66.46 | wind | 3 | 14400 | < th | dose independent | rect. | 5 | 10 |
| 794 | 66.48 | wind | 7 | 14400 | > th | dose independent | rect. | 22 | 2 |
| 801 | 66.49 | wind | 3 | 14400 | > th | dose independent | rect. | 5 | 10 |
| 818 | 66.51 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 22 | 15 |
| 828 | 66.52 | wind | 7 | 14400 | < th | dose independent | rect. | 22 | 2 |
| 834 | 66.52 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 19 | 18 |
| 837 | 66.53 | humidity | 70 | 43200 | < th | dose independent | rect. | 23 | 8 |
| 860 | 66.55 | humidity | 90 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 866 | 66.55 | temperature | 15 | 4320 | > th | dose dependent | sin | 16 | NA |
| 883 | 66.57 | humidity | 70 | 43200 | > th | dose independent | rect. | 1 | 2 |
| 924 | 66.61 | wind | 9 | 14400 | > th | dose dependent | rect. | 22 | 3 |
| 926 | 66.62 | atmosphere | 995 | 43200 | < th | dose independent | sin | 6 | NA |
| 927 | 66.62 | humidity | 50 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 941 | 66.63 | radiation | 10 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 971 | 66.66 | atmosphere | 995 | 43200 | > th | dose independent | sin | 7 | NA |
| 973 | 66.66 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 974 | 66.66 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 975 | 66.66 | humidity | 60 | 43200 | > th | dose independent | rect. | 23 | 6 |