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Os08g0127300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.6 (0.0118) R2 : 0.0469
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.118 (0.0249) R2dN8 : 0.0605 R2N8 : 0.0469
σ : 0.223
deviance : 22.74
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
13.14 0.17 11.6 0.226 0.37 0.394 0.0206 -0.518 0.145 1.02 77.73 828 -- --
13.49 0.171 11.6 0.197 0.37 0.404 0.16 -- 0.14 0.871 77 830 -- --
13.14 0.169 11.6 0.226 0.37 0.395 -- -0.53 0.145 1.02 77.69 828 -- --
13.59 0.172 11.6 0.191 0.366 0.388 -- -- 0.142 1.04 76.8 830 -- --
17.14 0.194 11.6 0.187 -- 0.21 -- -0.0368 0.131 -- 77 1751 -- --
16.17 0.189 11.6 0.153 0.32 -- 0.0795 -- 0.128 3.15 -- -- -- --
16.19 0.188 11.6 0.151 0.32 -- -- -- 0.128 3.2 -- -- -- --
17.15 0.194 11.6 0.185 -- 0.21 -- -- 0.131 -- 77 1751 -- --
14.49 0.177 11.6 -- 0.36 0.363 -- -- 0.12 1.19 76.58 830 -- --
22.02 0.219 11.6 0.164 -- -- -- -- 0.136 -- -- -- -- --
16.79 0.192 11.6 -- 0.323 -- -- -- 0.111 3.2 -- -- -- --
18.05 0.199 11.6 -- -- 0.206 -- -- 0.111 -- 77 1751 -- --
22.74 0.223 11.6 -- -- -- -- -- 0.118 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 12.77 humidity 70 1440 > th dose dependent rect. 11 2
2 12.77 humidity 80 1440 > th dose dependent rect. 10 4
5 12.93 radiation 1 720 < th dose dependent rect. 21 22
7 12.96 humidity 80 720 < th dose independent rect. 10 11
9 12.97 humidity 80 1440 > th dose independent rect. 10 4
14 13.00 radiation 1 720 < th dose independent rect. 7 12
15 13.01 humidity 70 720 > th dose dependent rect. 9 18
21 13.04 humidity 80 1440 < th dose independent rect. 10 4
24 13.06 humidity 80 720 > th dose independent rect. 10 18
26 13.06 radiation 1 720 < th dose independent rect. 21 22
29 13.07 radiation 10 720 < th dose dependent rect. 14 5
42 13.11 radiation 1 720 > th dose independent rect. 9 22
44 13.11 humidity 80 720 > th dose dependent rect. 9 12
48 13.13 humidity 80 720 < th dose independent rect. 10 7
49 13.13 radiation 10 1440 < th dose dependent rect. 15 2
75 13.18 humidity 80 720 < th dose independent sin 21 NA
84 13.18 radiation 1 720 < th dose dependent rect. 7 12
97 13.20 humidity 90 720 < th dose dependent rect. 10 14
125 13.23 humidity 50 720 > th dose dependent sin 17 NA
132 13.24 humidity 80 720 > th dose independent rect. 10 11
160 13.26 radiation 1 1440 < th dose independent rect. 10 2
167 13.26 radiation 1 1440 < th dose dependent rect. 10 2
204 13.29 humidity 70 720 > th dose dependent sin 20 NA
242 13.32 humidity 90 720 < th dose dependent sin 19 NA
253 13.33 radiation 10 720 < th dose dependent rect. 14 11
285 13.35 radiation 10 1440 < th dose dependent rect. 10 9
289 13.35 radiation 10 1440 < th dose dependent rect. 10 14
321 13.37 radiation 10 1440 < th dose dependent sin 17 NA
358 13.38 humidity 50 720 > th dose dependent rect. 17 2
397 13.40 radiation 10 1440 > th dose independent rect. 10 8
422 13.40 humidity 60 720 > th dose dependent rect. 14 11
437 13.41 humidity 80 720 > th dose independent sin 20 NA
438 13.41 radiation 1 1440 > th dose independent rect. 10 2
453 13.41 humidity 50 720 > th dose dependent rect. 15 4
553 13.45 radiation 1 720 < th dose independent sin 22 NA
564 13.45 radiation 1 720 < th dose independent rect. 7 18
566 13.45 humidity 80 720 > th dose independent rect. 24 21
577 13.45 humidity 90 720 < th dose dependent rect. 14 7
628 13.47 humidity 60 720 > th dose dependent rect. 14 8
647 13.48 radiation 1 720 < th dose independent rect. 3 16
671 13.48 humidity 50 720 > th dose dependent rect. 21 22
695 13.49 radiation 1 720 < th dose dependent sin 1 NA
704 13.49 radiation 1 720 < th dose dependent rect. 3 16
709 13.49 humidity 50 720 > th dose dependent rect. 13 23
764 13.51 humidity 70 720 > th dose dependent rect. 24 23
796 13.53 radiation 10 1440 > th dose independent sin 18 NA
807 13.53 humidity 60 720 > th dose dependent no NA NA
832 13.54 radiation 1 720 < th dose independent rect. 12 7
938 13.57 radiation 1 720 > th dose independent sin 22 NA
961 13.57 humidity 80 720 < th dose independent rect. 19 23