Os08g0125800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Concanavalin A-like lectin/glucanase domain containing protein.
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Os08g0125800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Concanavalin A-like lectin/glucanase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 355.93 | 0.886 | 4.33 | 0.545 | 2.08 | 1.54 | 0.371 | -0.163 | 0.799 | 0.337 | 55.86 | 900 | -- | -- |
| 355.95 | 0.879 | 4.33 | 0.536 | 2.07 | 1.53 | 0.421 | -- | 0.797 | 0.349 | 55.75 | 903 | -- | -- |
| 356.38 | 0.879 | 4.33 | 0.555 | 2.08 | 1.55 | -- | -0.464 | 0.801 | 0.353 | 55.73 | 901 | -- | -- |
| 356.71 | 0.88 | 4.33 | 0.517 | 2.07 | 1.52 | -- | -- | 0.795 | 0.353 | 56 | 900 | -- | -- |
| 405.5 | 0.943 | 4.28 | 0.463 | -- | 1.57 | -- | 0.181 | 0.89 | -- | 67.86 | 1672 | -- | -- |
| 390.05 | 0.926 | 4.33 | 0.475 | 1.64 | -- | 0.35 | -- | 0.746 | 1.2 | -- | -- | -- | -- |
| 390.55 | 0.925 | 4.33 | 0.462 | 1.64 | -- | -- | -- | 0.744 | 1.21 | -- | -- | -- | -- |
| 405.49 | 0.942 | 4.28 | 0.47 | -- | 1.57 | -- | -- | 0.892 | -- | 68 | 1672 | -- | -- |
| 363.64 | 0.888 | 4.34 | -- | 2.08 | 1.5 | -- | -- | 0.756 | 0.367 | 59.42 | 903 | -- | -- |
| 557.07 | 1.1 | 4.3 | 0.526 | -- | -- | -- | -- | 0.778 | -- | -- | -- | -- | -- |
| 396.19 | 0.931 | 4.34 | -- | 1.65 | -- | -- | -- | 0.693 | 1.22 | -- | -- | -- | -- |
| 410.59 | 0.947 | 4.29 | -- | -- | 1.57 | -- | -- | 0.845 | -- | 69 | 1675 | -- | -- |
| 564.36 | 1.11 | 4.31 | -- | -- | -- | -- | -- | 0.719 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 348.59 | humidity | 60 | 720 | > th | dose dependent | rect. | 13 | 17 |
| 28 | 351.41 | humidity | 90 | 720 | < th | dose dependent | rect. | 14 | 14 |
| 65 | 352.82 | humidity | 60 | 720 | > th | dose dependent | sin | 16 | NA |
| 74 | 352.94 | humidity | 60 | 720 | > th | dose dependent | rect. | 13 | 9 |
| 85 | 353.33 | atmosphere | 1000 | 90 | > th | dose independent | rect. | 19 | 13 |
| 102 | 353.81 | humidity | 80 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 111 | 353.92 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 17 | 14 |
| 130 | 354.29 | humidity | 80 | 720 | > th | dose independent | rect. | 13 | 8 |
| 137 | 354.44 | humidity | 80 | 720 | < th | dose independent | rect. | 14 | 7 |
| 140 | 354.49 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 15 | 17 |
| 160 | 354.71 | humidity | 80 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 166 | 354.78 | atmosphere | 1000 | 270 | < th | dose independent | sin | 14 | NA |
| 171 | 354.85 | humidity | 90 | 720 | < th | dose dependent | rect. | 14 | 5 |
| 176 | 354.93 | humidity | 90 | 720 | < th | dose dependent | sin | 15 | NA |
| 181 | 355.02 | humidity | 60 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 183 | 355.05 | wind | 1 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 201 | 355.21 | humidity | 80 | 720 | > th | dose independent | rect. | 11 | 19 |
| 207 | 355.26 | wind | 1 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 213 | 355.33 | humidity | 60 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 215 | 355.36 | atmosphere | 1000 | 270 | > th | dose independent | sin | 13 | NA |
| 224 | 355.44 | humidity | 90 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 227 | 355.48 | humidity | 80 | 720 | < th | dose independent | rect. | 14 | 4 |
| 238 | 355.56 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 4 |
| 253 | 355.69 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 17 | 17 |
| 307 | 356.10 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 317 | 356.18 | wind | 1 | 14400 | > th | dose independent | rect. | 1 | 5 |
| 342 | 356.46 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 5 |
| 389 | 356.78 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 453 | 357.25 | humidity | 80 | 720 | > th | dose independent | sin | 18 | NA |
| 455 | 357.25 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 16 | 22 |
| 495 | 357.53 | atmosphere | 1000 | 1440 | > th | dose independent | rect. | 22 | 1 |
| 540 | 357.74 | humidity | 50 | 720 | > th | dose dependent | rect. | 24 | 23 |
| 587 | 357.98 | humidity | 80 | 720 | < th | dose independent | sin | 18 | NA |
| 693 | 358.39 | humidity | 50 | 720 | > th | dose dependent | rect. | 18 | 23 |
| 721 | 358.50 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 748 | 358.59 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 3 | 23 |
| 767 | 358.63 | humidity | 50 | 720 | > th | dose dependent | no | NA | NA |
| 794 | 358.72 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 821 | 358.85 | atmosphere | 1000 | 1440 | < th | dose independent | rect. | 21 | 3 |
| 833 | 358.92 | atmosphere | 1000 | 270 | < th | dose independent | no | NA | NA |
| 850 | 358.98 | atmosphere | 1000 | 1440 | < th | dose independent | rect. | 22 | 1 |
| 853 | 358.99 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 6 | 23 |
| 860 | 359.03 | atmosphere | 1000 | 30 | > th | dose independent | sin | 11 | NA |
| 893 | 359.14 | atmosphere | 1000 | 270 | > th | dose independent | no | NA | NA |
| 942 | 359.32 | atmosphere | 1000 | 270 | < th | dose dependent | rect. | 14 | 19 |
| 959 | 359.37 | atmosphere | 1000 | 10 | < th | dose dependent | sin | 11 | NA |
| 969 | 359.40 | humidity | 80 | 1440 | > th | dose independent | rect. | 23 | 22 |