Os08g0124900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Concanavalin A-like lectin/glucanase domain containing protein.
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Os08g0124900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Concanavalin A-like lectin/glucanase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 218.25 | 0.694 | 5.51 | 0.13 | 2.2 | 1.45 | 2.87 | -0.815 | 0.713 | 23.6 | 20 | 4211 | -- | -- |
| 219.31 | 0.69 | 5.49 | 0.168 | 2.18 | 1.59 | 2.87 | -- | 0.714 | 23.6 | 20 | 5621 | -- | -- |
| 253.02 | 0.741 | 5.51 | 0.0553 | 2.2 | 1.49 | -- | -0.71 | 0.712 | 23.7 | 20.1 | 4478 | -- | -- |
| 253.39 | 0.741 | 5.49 | -0.0272 | 2.19 | 1.65 | -- | -- | 0.689 | 23.7 | 20 | 5861 | -- | -- |
| 547.14 | 1.09 | 5.48 | -0.0316 | -- | 1.77 | -- | -0.332 | 0.617 | -- | 20.87 | 5298 | -- | -- |
| 265.18 | 0.763 | 5.38 | 1.24 | 2.23 | -- | 2.88 | -- | 1.18 | 23.6 | -- | -- | -- | -- |
| 301.12 | 0.813 | 5.39 | 1.13 | 2.22 | -- | -- | -- | 1.17 | 23.7 | -- | -- | -- | -- |
| 543.65 | 1.09 | 5.44 | -0.00663 | -- | 1.97 | -- | -- | 0.694 | -- | 19.9 | 3793 | -- | -- |
| 253.32 | 0.741 | 5.5 | -- | 2.2 | 1.65 | -- | -- | 0.686 | 23.7 | 19.94 | 5861 | -- | -- |
| 609.92 | 1.15 | 5.34 | 1.19 | -- | -- | -- | -- | 1.2 | -- | -- | -- | -- | -- |
| 334.56 | 0.856 | 5.42 | -- | 2.23 | -- | -- | -- | 1.04 | 23.7 | -- | -- | -- | -- |
| 543.59 | 1.09 | 5.46 | -- | -- | 1.98 | -- | -- | 0.675 | -- | 19.95 | 3810 | -- | -- |
| 647.28 | 1.19 | 5.37 | -- | -- | -- | -- | -- | 1.06 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 201.88 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 2 | 203.37 | humidity | 70 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 3 | 203.52 | radiation | 1 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 5 | 203.68 | radiation | 1 | 43200 | < th | dose dependent | rect. | 22 | 7 |
| 10 | 205.27 | humidity | 70 | 43200 | < th | dose independent | rect. | 14 | 4 |
| 11 | 205.46 | wind | 1 | 14400 | < th | dose dependent | rect. | 20 | 9 |
| 12 | 205.48 | wind | 1 | 43200 | < th | dose independent | rect. | 23 | 3 |
| 13 | 205.63 | wind | 1 | 43200 | > th | dose independent | rect. | 22 | 4 |
| 15 | 205.65 | humidity | 70 | 43200 | > th | dose independent | rect. | 15 | 4 |
| 16 | 205.69 | humidity | 70 | 43200 | < th | dose independent | rect. | 13 | 6 |
| 22 | 205.84 | humidity | 80 | 43200 | > th | dose independent | rect. | 18 | 5 |
| 29 | 206.08 | humidity | 70 | 43200 | > th | dose independent | rect. | 12 | 8 |
| 30 | 206.12 | wind | 1 | 43200 | < th | dose dependent | rect. | 23 | 3 |
| 31 | 206.13 | humidity | 50 | 43200 | > th | dose independent | rect. | 14 | 2 |
| 33 | 206.31 | atmosphere | 1000 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 35 | 206.33 | humidity | 80 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 36 | 206.33 | humidity | 80 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 37 | 206.35 | humidity | 70 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 38 | 206.36 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 110 | 207.69 | radiation | 40 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 112 | 207.69 | radiation | 1 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 159 | 208.13 | radiation | 10 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 183 | 208.24 | wind | 1 | 43200 | < th | dose dependent | rect. | 13 | 13 |
| 198 | 208.32 | wind | 1 | 43200 | < th | dose dependent | rect. | 16 | 10 |
| 232 | 208.47 | radiation | 40 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 250 | 208.57 | humidity | 50 | 43200 | > th | dose independent | rect. | 13 | 20 |
| 262 | 208.61 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 270 | 208.64 | wind | 1 | 14400 | < th | dose dependent | sin | 12 | NA |
| 302 | 208.73 | radiation | 20 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 364 | 208.95 | atmosphere | 1015 | 43200 | < th | dose dependent | sin | 11 | NA |
| 372 | 208.97 | atmosphere | 995 | 43200 | > th | dose dependent | sin | 11 | NA |
| 404 | 209.06 | radiation | 20 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 456 | 209.17 | humidity | 50 | 43200 | > th | dose independent | rect. | 13 | 4 |
| 457 | 209.17 | humidity | 50 | 43200 | > th | dose independent | rect. | 13 | 9 |
| 464 | 209.18 | humidity | 50 | 43200 | > th | dose independent | rect. | 13 | 11 |
| 480 | 209.20 | humidity | 60 | 43200 | < th | dose dependent | rect. | 20 | 19 |
| 531 | 209.32 | radiation | 40 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 576 | 209.39 | humidity | 60 | 43200 | < th | dose dependent | rect. | 24 | 15 |
| 589 | 209.42 | humidity | 70 | 43200 | > th | dose independent | sin | 21 | NA |
| 714 | 209.63 | humidity | 70 | 43200 | < th | dose independent | sin | 21 | NA |
| 761 | 209.70 | humidity | 60 | 43200 | < th | dose dependent | rect. | 8 | 7 |
| 938 | 209.88 | atmosphere | 1015 | 43200 | < th | dose dependent | no | NA | NA |
| 982 | 209.92 | humidity | 60 | 43200 | < th | dose dependent | rect. | 11 | 4 |
| 1000 | 209.94 | atmosphere | 995 | 43200 | > th | dose dependent | no | NA | NA |