Os08g0124700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Resistance protein candidate (Fragment).
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Os08g0124700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Resistance protein candidate (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 384.42 | 0.921 | 4.52 | 0.178 | 2 | -2.02 | 1.1 | -1.65 | 0.172 | 0.133 | 23.1 | 539 | -- | -- |
| 387.72 | 0.917 | 4.54 | 0.0603 | 1.99 | -1.7 | 1.29 | -- | 0.169 | 0.0318 | 23.22 | 538 | -- | -- |
| 389.67 | 0.919 | 4.52 | 0.157 | 2 | -1.99 | -- | -1.67 | 0.173 | 0.129 | 23.1 | 556 | -- | -- |
| 394.26 | 0.925 | 4.55 | -0.069 | 2.01 | -1.76 | -- | -- | 0.127 | 0.164 | 23.25 | 510 | -- | -- |
| 590.63 | 1.13 | 4.55 | -0.0905 | -- | -2.73 | -- | -1.31 | -0.0914 | -- | 27.42 | 875 | -- | -- |
| 425.9 | 0.967 | 4.49 | 0.414 | 2.1 | -- | 1.25 | -- | 0.414 | 23.9 | -- | -- | -- | -- |
| 432.65 | 0.974 | 4.5 | 0.363 | 2.1 | -- | -- | -- | 0.408 | 23.9 | -- | -- | -- | -- |
| 592.84 | 1.13 | 4.58 | -0.355 | -- | -2.68 | -- | -- | -0.148 | -- | 27.8 | 883 | -- | -- |
| 394.35 | 0.925 | 4.55 | -- | 2.03 | -1.72 | -- | -- | 0.141 | 0.161 | 23.25 | 503 | -- | -- |
| 709.59 | 1.24 | 4.45 | 0.427 | -- | -- | -- | -- | 0.436 | -- | -- | -- | -- | -- |
| 436.13 | 0.977 | 4.51 | -- | 2.1 | -- | -- | -- | 0.368 | 23.9 | -- | -- | -- | -- |
| 595.74 | 1.14 | 4.57 | -- | -- | -2.53 | -- | -- | -0.0819 | -- | 27.8 | 878 | -- | -- |
| 714.4 | 1.25 | 4.46 | -- | -- | -- | -- | -- | 0.389 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 378.68 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 2 | 380.01 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 3 | 380.07 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 7 |
| 4 | 380.07 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 9 |
| 6 | 380.20 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 9 |
| 8 | 380.29 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 7 |
| 25 | 380.78 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 37 | 381.24 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 41 | 381.36 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 60 | 381.95 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 3 |
| 108 | 382.98 | temperature | 20 | 1440 | > th | dose independent | sin | 8 | NA |
| 118 | 383.15 | radiation | 10 | 4320 | > th | dose dependent | rect. | 5 | 2 |
| 139 | 383.30 | temperature | 20 | 1440 | < th | dose independent | sin | 8 | NA |
| 154 | 383.54 | temperature | 20 | 270 | > th | dose independent | rect. | 22 | 10 |
| 162 | 383.63 | wind | 1 | 14400 | < th | dose dependent | rect. | 20 | 6 |
| 164 | 383.66 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 173 | 383.80 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 15 |
| 289 | 385.28 | temperature | 20 | 270 | > th | dose independent | rect. | 10 | 22 |
| 294 | 385.34 | radiation | 40 | 43200 | < th | dose dependent | rect. | 18 | 11 |
| 296 | 385.35 | radiation | 20 | 43200 | < th | dose dependent | rect. | 18 | 11 |
| 336 | 385.74 | wind | 1 | 14400 | > th | dose independent | rect. | 21 | 5 |
| 342 | 385.75 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 344 | 385.77 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 348 | 385.80 | wind | 1 | 14400 | < th | dose independent | rect. | 21 | 5 |
| 364 | 385.95 | radiation | 10 | 4320 | > th | dose independent | rect. | 5 | 2 |
| 394 | 386.06 | radiation | 40 | 43200 | < th | dose dependent | rect. | 18 | 7 |
| 428 | 386.24 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 431 | 386.25 | radiation | 10 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 438 | 386.28 | radiation | 10 | 43200 | < th | dose dependent | rect. | 18 | 5 |
| 443 | 386.30 | temperature | 25 | 1440 | < th | dose dependent | sin | 10 | NA |
| 490 | 386.56 | wind | 1 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 503 | 386.65 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 6 |
| 511 | 386.69 | temperature | 10 | 1440 | > th | dose dependent | rect. | 22 | 6 |
| 572 | 387.04 | temperature | 25 | 720 | < th | dose dependent | rect. | 18 | 20 |
| 705 | 387.58 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 739 | 387.71 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 777 | 387.85 | temperature | 20 | 1440 | < th | dose independent | rect. | 12 | 19 |
| 778 | 387.85 | temperature | 20 | 270 | > th | dose independent | rect. | 22 | 22 |
| 822 | 388.04 | temperature | 20 | 90 | < th | dose independent | rect. | 22 | 20 |
| 901 | 388.30 | temperature | 20 | 90 | < th | dose independent | rect. | 22 | 17 |
| 917 | 388.35 | wind | 1 | 14400 | < th | dose dependent | rect. | 20 | 3 |
| 923 | 388.37 | wind | 1 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 925 | 388.37 | temperature | 20 | 90 | > th | dose independent | rect. | 13 | 19 |
| 943 | 388.42 | wind | 1 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 953 | 388.44 | wind | 1 | 720 | > th | dose independent | rect. | 4 | 23 |
| 966 | 388.48 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 23 |
| 985 | 388.55 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 993 | 388.58 | temperature | 25 | 720 | < th | dose dependent | rect. | 12 | 23 |