Os08g0123600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os08g0123600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 191.91 | 0.651 | 3.64 | 1.67 | 0.15 | 50.7 | -0.868 | 98.4 | 0.0324 | 7.54 | 15.02 | 4074 | -- | -- |
| 224.75 | 0.704 | 3.02 | -0.167 | 0.167 | 1.28 | -1.12 | -- | -0.087 | 9.2 | 15.02 | 4074 | -- | -- |
| 193.69 | 0.648 | 3.6 | 1.51 | 0.152 | 50.8 | -- | 98.4 | 0.023 | 6.79 | 14.96 | 4042 | -- | -- |
| 195.56 | 0.651 | 3.02 | 0.184 | 0.0939 | 3.25 | -- | -- | -0.035 | 8.83 | 15.14 | 4057 | -- | -- |
| 194.87 | 0.65 | 3.61 | 1.56 | -- | 52.7 | -- | 102 | 0.0385 | -- | 14.95 | 4039 | -- | -- |
| 227.81 | 0.708 | 3.02 | -0.223 | 0.157 | -- | -1.01 | -- | -0.101 | 8.81 | -- | -- | -- | -- |
| 231.16 | 0.712 | 3.02 | -0.258 | 0.167 | -- | -- | -- | -0.102 | 8.02 | -- | -- | -- | -- |
| 196.07 | 0.652 | 3 | 0.2 | -- | 3.35 | -- | -- | 0.0192 | -- | 15.13 | 4042 | -- | -- |
| 195.64 | 0.651 | 2.99 | -- | 0.162 | 3.19 | -- | -- | -0.000854 | 7.11 | 15.08 | 4057 | -- | -- |
| 232.68 | 0.713 | 3.02 | -0.256 | -- | -- | -- | -- | -0.0998 | -- | -- | -- | -- | -- |
| 232.91 | 0.714 | 3.01 | -- | 0.165 | -- | -- | -- | -0.0732 | 8.13 | -- | -- | -- | -- |
| 196.87 | 0.653 | 3 | -- | -- | 3.24 | -- | -- | -0.0106 | -- | 15.06 | 4043 | -- | -- |
| 234.41 | 0.715 | 3.02 | -- | -- | -- | -- | -- | -0.0714 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 191.69 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 12 | 14 |
| 2 | 191.70 | temperature | 15.0 | 4320 | < th | dose dependent | sin | 17 | NA |
| 4 | 191.70 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 6 | 19 |
| 7 | 191.72 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 9 | 17 |
| 10 | 191.73 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 14 | 11 |
| 27 | 191.87 | temperature | 15.0 | 4320 | < th | dose independent | rect. | 14 | 3 |
| 36 | 191.93 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 14 | 1 |
| 37 | 191.93 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 19 | 6 |
| 43 | 191.97 | temperature | 15.0 | 4320 | < th | dose dependent | sin | 22 | NA |
| 63 | 192.27 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 78 | 192.46 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 14 | 3 |
| 97 | 192.53 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 6 | 13 |
| 107 | 192.66 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 215 | 193.46 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 231 | 193.63 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 9 | 2 |
| 235 | 193.67 | temperature | 15.0 | 4320 | < th | dose dependent | no | NA | NA |
| 242 | 193.67 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 12 | 23 |
| 260 | 193.77 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 14 | 23 |
| 264 | 193.79 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 16 | 23 |
| 270 | 193.87 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 7 | 7 |
| 280 | 193.94 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 21 | 23 |
| 288 | 194.01 | temperature | 15.0 | 4320 | < th | dose independent | rect. | 12 | 6 |
| 301 | 194.12 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 9 | 2 |
| 334 | 194.31 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 341 | 194.38 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 9 | 2 |
| 349 | 194.44 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 9 | 6 |
| 371 | 194.60 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 23 | 7 |
| 374 | 194.62 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 7 | 5 |
| 391 | 194.75 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 12 | 5 |
| 395 | 194.77 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 2 | 21 |
| 409 | 194.86 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 7 | 10 |
| 413 | 194.90 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 421 | 194.94 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 6 | 17 |
| 429 | 195.03 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 4 | 5 |
| 438 | 195.07 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 447 | 195.14 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 450 | 195.15 | temperature | 15.0 | 4320 | < th | dose independent | rect. | 11 | 2 |
| 498 | 195.32 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 23 | 8 |
| 534 | 195.40 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 6 | 7 |
| 544 | 195.45 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 550 | 195.46 | radiation | 10.0 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 563 | 195.47 | radiation | 10.0 | 4320 | > th | dose independent | rect. | 5 | 1 |
| 576 | 195.47 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 7 | 5 |
| 580 | 195.49 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 589 | 195.54 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 591 | 195.55 | temperature | 15.0 | 4320 | < th | dose independent | sin | 21 | NA |
| 614 | 195.58 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 6 | 14 |
| 655 | 195.77 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 3 | 4 |
| 726 | 196.00 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 14 | 2 |
| 744 | 196.10 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 748 | 196.10 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 750 | 196.11 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 18 | 12 |
| 760 | 196.16 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 767 | 196.19 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 784 | 196.24 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 788 | 196.26 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 10 | 2 |
| 791 | 196.26 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 10 | 2 |
| 796 | 196.28 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 6 | 5 |
| 799 | 196.30 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 12 | 13 |
| 811 | 196.36 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 821 | 196.38 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 10 | 13 |
| 822 | 196.39 | temperature | 15.0 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 882 | 196.58 | temperature | 20.0 | 270 | < th | dose dependent | sin | 22 | NA |
| 914 | 196.71 | temperature | 15.0 | 4320 | > th | dose independent | sin | 20 | NA |
| 934 | 196.76 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 8 | 3 |
| 937 | 196.76 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 8 | 3 |
| 972 | 196.89 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 6 | 19 |
| 977 | 196.90 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 19 | 3 |
| 978 | 196.90 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 3 | 20 |
| 986 | 196.93 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 14 | 11 |
| 989 | 196.93 | temperature | 15.0 | 4320 | < th | dose independent | rect. | 12 | 18 |