Os08g0123300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os08g0123300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 47.96 | 0.325 | 8.74 | -0.232 | 0.986 | -1.09 | 0.234 | 0.318 | -0.464 | 18.8 | 5.961 | 604 | -- | -- |
| 48.02 | 0.323 | 8.75 | -0.278 | 0.991 | -1.08 | 0.327 | -- | -0.479 | 18.8 | 14.7 | 589 | -- | -- |
| 48.06 | 0.323 | 8.74 | -0.212 | 0.988 | -1.08 | -- | 0.476 | -0.457 | 18.7 | 4.405 | 592 | -- | -- |
| 48.22 | 0.323 | 8.75 | -0.297 | 0.997 | -1.07 | -- | -- | -0.482 | 18.7 | 14.7 | 573 | -- | -- |
| 74.22 | 0.401 | 8.72 | -0.245 | -- | -0.924 | -- | 0.157 | -0.48 | -- | 1.978 | 1326 | -- | -- |
| 61.94 | 0.369 | 8.78 | -0.549 | 0.719 | -- | -0.0077 | -- | -0.642 | 18.5 | -- | -- | -- | -- |
| 61.94 | 0.369 | 8.78 | -0.549 | 0.718 | -- | -- | -- | -0.642 | 18.5 | -- | -- | -- | -- |
| 74.24 | 0.401 | 8.73 | -0.279 | -- | -0.922 | -- | -- | -0.489 | -- | 5.847 | 1331 | -- | -- |
| 50.25 | 0.33 | 8.74 | -- | 1.02 | -1.19 | -- | -- | -0.429 | 18.7 | 14.7 | 588 | -- | -- |
| 88.78 | 0.44 | 8.76 | -0.568 | -- | -- | -- | -- | -0.657 | -- | -- | -- | -- | -- |
| 69.89 | 0.391 | 8.76 | -- | 0.726 | -- | -- | -- | -0.581 | 18.4 | -- | -- | -- | -- |
| 76.01 | 0.406 | 8.72 | -- | -- | -1.04 | -- | -- | -0.44 | -- | 11.28 | 1338 | -- | -- |
| 97.27 | 0.46 | 8.75 | -- | -- | -- | -- | -- | -0.594 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 40.40 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 4 | 17 |
| 7 | 41.78 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 19 |
| 58 | 43.92 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 62 | 43.98 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 18 |
| 65 | 44.10 | temperature | 30.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 106 | 45.01 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 7 | 21 |
| 115 | 45.15 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 9 |
| 116 | 45.17 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 9 | 19 |
| 160 | 45.62 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 162 | 45.64 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 5 |
| 170 | 45.67 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 7 | 8 |
| 189 | 45.83 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 220 | 46.10 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 22 | 16 |
| 226 | 46.13 | temperature | 10.0 | 720 | > th | dose dependent | sin | 6 | NA |
| 247 | 46.21 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 250 | 46.23 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 10 | 21 |
| 251 | 46.24 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 7 | 2 |
| 271 | 46.33 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 19 |
| 281 | 46.41 | temperature | 30.0 | 720 | < th | dose dependent | sin | 5 | NA |
| 390 | 46.90 | radiation | 1.0 | 270 | < th | dose independent | rect. | 5 | 22 |
| 395 | 46.91 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 8 | 18 |
| 426 | 47.02 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 429 | 47.02 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 11 | 11 |
| 445 | 47.08 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 487 | 47.23 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 15 |
| 494 | 47.26 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 8 | 8 |
| 501 | 47.28 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 518 | 47.34 | temperature | 30.0 | 270 | < th | dose independent | rect. | 15 | 11 |
| 544 | 47.40 | temperature | 30.0 | 720 | < th | dose independent | rect. | 15 | 4 |
| 552 | 47.41 | humidity | 70.0 | 270 | > th | dose independent | rect. | 16 | 10 |
| 555 | 47.42 | radiation | 1.0 | 30 | < th | dose independent | sin | 12 | NA |
| 588 | 47.51 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 5 |
| 590 | 47.51 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 603 | 47.55 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 5 |
| 619 | 47.58 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 10 |
| 628 | 47.60 | temperature | 30.0 | 720 | < th | dose independent | rect. | 22 | 21 |
| 639 | 47.62 | temperature | 30.0 | 720 | < th | dose independent | rect. | 24 | 19 |
| 656 | 47.65 | radiation | 20.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 666 | 47.67 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 671 | 47.68 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 9 | 18 |
| 674 | 47.69 | wind | 7.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 679 | 47.69 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 7 | 14 |
| 687 | 47.72 | humidity | 70.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 694 | 47.73 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 696 | 47.73 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 703 | 47.74 | wind | 9.0 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 704 | 47.74 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 1 | 9 |
| 714 | 47.76 | humidity | 80.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 715 | 47.76 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 737 | 47.80 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 739 | 47.80 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 740 | 47.80 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 742 | 47.80 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 743 | 47.80 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 745 | 47.80 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 781 | 47.88 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 801 | 47.92 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 803 | 47.92 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 15 | 12 |
| 830 | 47.98 | wind | 7.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 841 | 48.00 | radiation | 1.0 | 30 | < th | dose dependent | sin | 12 | NA |
| 846 | 48.00 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 7 | 19 |
| 854 | 48.02 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 13 | 13 |
| 873 | 48.05 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 897 | 48.10 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 899 | 48.10 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 900 | 48.10 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 903 | 48.10 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 909 | 48.10 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 911 | 48.10 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 926 | 48.12 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 7 | 8 |
| 947 | 48.16 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 952 | 48.17 | temperature | 10.0 | 720 | > th | dose dependent | no | NA | NA |