Os08g0122800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os08g0122800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.66 | 0.392 | 8.93 | 1.02 | 0.841 | -0.405 | -0.356 | -2.04 | 0.577 | 21.1 | 26 | 255 | -- | -- |
| 75.59 | 0.405 | 8.97 | 0.668 | 0.816 | -0.294 | -0.427 | -- | 0.498 | 21.2 | 28.4 | 258 | -- | -- |
| 69.98 | 0.39 | 8.93 | 1.02 | 0.85 | -0.397 | -- | -1.99 | 0.578 | 21.1 | 26.03 | 219 | -- | -- |
| 76 | 0.406 | 8.97 | 0.684 | 0.838 | -0.271 | -- | -- | 0.509 | 20.9 | 26.2 | 321 | -- | -- |
| 106.04 | 0.48 | 8.93 | 0.84 | -- | -0.82 | -- | -1.52 | 0.469 | -- | 29.29 | 569 | -- | -- |
| 76.76 | 0.411 | 8.95 | 0.75 | 0.864 | -- | -0.326 | -- | 0.562 | 20.8 | -- | -- | -- | -- |
| 77.11 | 0.411 | 8.95 | 0.762 | 0.867 | -- | -- | -- | 0.562 | 20.7 | -- | -- | -- | -- |
| 108.31 | 0.485 | 8.97 | 0.548 | -- | -0.829 | -- | -- | 0.4 | -- | 30.31 | 624 | -- | -- |
| 83.98 | 0.427 | 9.01 | -- | 0.851 | -0.553 | -- | -- | 0.331 | 20.7 | 25.4 | 3824 | -- | -- |
| 119.6 | 0.511 | 8.93 | 0.76 | -- | -- | -- | -- | 0.555 | -- | -- | -- | -- | -- |
| 92.4 | 0.45 | 8.97 | -- | 0.865 | -- | -- | -- | 0.477 | 20.8 | -- | -- | -- | -- |
| 115.38 | 0.5 | 8.99 | -- | -- | -1.02 | -- | -- | 0.301 | -- | 29.79 | 639 | -- | -- |
| 134.84 | 0.542 | 8.95 | -- | -- | -- | -- | -- | 0.471 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.50 | wind | 1 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 3 | 64.97 | wind | 1 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 4 | 65.50 | temperature | 20 | 270 | > th | dose dependent | rect. | 21 | 15 |
| 11 | 66.23 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 13 |
| 14 | 66.35 | temperature | 20 | 270 | > th | dose dependent | rect. | 6 | 6 |
| 15 | 66.35 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 12 |
| 24 | 66.52 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 10 |
| 28 | 66.58 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 10 |
| 31 | 66.68 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 10 |
| 35 | 66.72 | temperature | 25 | 270 | > th | dose independent | rect. | 22 | 14 |
| 43 | 66.82 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 12 |
| 52 | 66.96 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 3 |
| 54 | 67.00 | temperature | 25 | 270 | < th | dose independent | sin | 6 | NA |
| 70 | 67.15 | temperature | 15 | 90 | > th | dose dependent | sin | 4 | NA |
| 71 | 67.15 | temperature | 30 | 90 | < th | dose dependent | sin | 4 | NA |
| 86 | 67.33 | temperature | 30 | 270 | < th | dose dependent | sin | 6 | NA |
| 125 | 67.55 | radiation | 1 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 142 | 67.68 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 19 |
| 153 | 67.76 | temperature | 15 | 10 | > th | dose dependent | rect. | 7 | 21 |
| 181 | 67.88 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 6 |
| 208 | 67.97 | temperature | 25 | 270 | > th | dose independent | sin | 6 | NA |
| 216 | 68.01 | temperature | 25 | 270 | > th | dose independent | rect. | 8 | 4 |
| 232 | 68.11 | radiation | 1 | 270 | < th | dose independent | rect. | 5 | 22 |
| 236 | 68.11 | humidity | 70 | 90 | > th | dose dependent | rect. | 11 | 16 |
| 245 | 68.15 | radiation | 1 | 270 | < th | dose dependent | rect. | 9 | 18 |
| 322 | 68.36 | wind | 1 | 14400 | > th | dose independent | rect. | 1 | 5 |
| 354 | 68.48 | radiation | 1 | 270 | < th | dose independent | rect. | 9 | 18 |
| 378 | 68.53 | humidity | 80 | 270 | > th | dose independent | rect. | 10 | 17 |
| 381 | 68.54 | temperature | 25 | 270 | > th | dose independent | rect. | 4 | 9 |
| 394 | 68.57 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 401 | 68.58 | radiation | 1 | 90 | < th | dose dependent | rect. | 21 | 22 |
| 459 | 68.74 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 10 |
| 538 | 68.89 | humidity | 70 | 10 | > th | dose dependent | rect. | 22 | 22 |
| 539 | 68.90 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 551 | 68.92 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 8 |
| 555 | 68.93 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 586 | 69.01 | temperature | 25 | 10 | > th | dose independent | rect. | 9 | 7 |
| 595 | 69.02 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 639 | 69.10 | radiation | 1 | 90 | < th | dose independent | rect. | 21 | 22 |
| 640 | 69.10 | humidity | 80 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 641 | 69.10 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 5 |
| 645 | 69.10 | humidity | 70 | 30 | > th | dose dependent | rect. | 9 | 21 |
| 717 | 69.22 | humidity | 80 | 720 | < th | dose independent | rect. | 10 | 5 |
| 765 | 69.29 | humidity | 70 | 30 | > th | dose dependent | rect. | 22 | 18 |
| 779 | 69.31 | humidity | 80 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 884 | 69.41 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 20 |
| 915 | 69.46 | wind | 5 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 930 | 69.48 | temperature | 25 | 270 | < th | dose dependent | rect. | 1 | 22 |
| 955 | 69.50 | temperature | 10 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 990 | 69.55 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 1000 | 69.56 | wind | 3 | 4320 | > th | dose dependent | rect. | 8 | 1 |