Os08g0120900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF247, plant family protein.
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Os08g0120900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF247, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.61 | 0.208 | 2.84 | -0.164 | 0.0752 | 0.479 | -0.138 | -3.12 | 0.00871 | 5.37 | 30.7 | 20 | -- | -- |
| 20.5 | 0.213 | 2.82 | 0.027 | 0.0788 | 0.173 | -0.113 | -- | 0.00735 | 5.65 | 30.7 | 20 | -- | -- |
| 19.65 | 0.206 | 2.84 | -0.163 | 0.0756 | 0.479 | -- | -3.08 | 0.00964 | 5.73 | 30.73 | 20 | -- | -- |
| 20.52 | 0.211 | 2.82 | 0.0254 | 0.0809 | 0.177 | -- | -- | 0.00851 | 5.86 | 30.7 | 21 | -- | -- |
| 19.92 | 0.209 | 2.84 | -0.157 | -- | 0.462 | -- | -3.16 | 0.00928 | -- | 30.7 | 20 | -- | -- |
| 21.24 | 0.216 | 2.82 | 0.0427 | 0.0522 | -- | -0.167 | -- | -0.00459 | 5.97 | -- | -- | -- | -- |
| 21.28 | 0.216 | 2.82 | 0.0419 | 0.0543 | -- | -- | -- | -0.00371 | 7.24 | -- | -- | -- | -- |
| 20.84 | 0.214 | 2.82 | 0.0306 | -- | 0.151 | -- | -- | 0.00812 | -- | 30.7 | 20 | -- | -- |
| 20.54 | 0.211 | 2.82 | -- | 0.0816 | 0.18 | -- | -- | 0.00599 | 5.83 | 30.7 | 20 | -- | -- |
| 21.44 | 0.216 | 2.82 | 0.0428 | -- | -- | -- | -- | -0.00278 | -- | -- | -- | -- | -- |
| 21.33 | 0.216 | 2.82 | -- | 0.0547 | -- | -- | -- | -0.00837 | 7.19 | -- | -- | -- | -- |
| 20.86 | 0.213 | 2.82 | -- | -- | 0.153 | -- | -- | 0.00492 | -- | 30.74 | 20 | -- | -- |
| 21.49 | 0.216 | 2.82 | -- | -- | -- | -- | -- | -0.00753 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.70 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 1 | 4 |
| 2 | 18.71 | temperature | 30.0 | 30 | < th | dose independent | rect. | 5 | 23 |
| 4 | 19.00 | temperature | 25.0 | 10 | > th | dose independent | rect. | 24 | 6 |
| 10 | 19.16 | humidity | 50.0 | 90 | < th | dose independent | rect. | 13 | 1 |
| 13 | 19.16 | humidity | 50.0 | 90 | < th | dose dependent | rect. | 13 | 1 |
| 15 | 19.17 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 12 | 1 |
| 16 | 19.17 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 12 | 1 |
| 29 | 19.21 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 33 | 19.22 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 4 | 1 |
| 34 | 19.23 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 35 | 19.23 | wind | 3.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 38 | 19.23 | wind | 7.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 40 | 19.23 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 43 | 19.23 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 47 | 19.23 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 56 | 19.23 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 57 | 19.23 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 58 | 19.23 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 59 | 19.23 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 68 | 19.23 | temperature | 25.0 | 10 | > th | dose independent | rect. | 3 | 2 |
| 69 | 19.23 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 72 | 19.23 | wind | 7.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 74 | 19.23 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 4 | 1 |
| 75 | 19.23 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 79 | 19.24 | temperature | 25.0 | 90 | > th | dose independent | rect. | 3 | 1 |
| 81 | 19.24 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 85 | 19.24 | temperature | 30.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 86 | 19.24 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 91 | 19.24 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 93 | 19.24 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 95 | 19.24 | radiation | 1.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 100 | 19.24 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 1 |
| 108 | 19.24 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 110 | 19.24 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 3 | 1 |
| 111 | 19.24 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 115 | 19.24 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 118 | 19.24 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 123 | 19.24 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 132 | 19.25 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 135 | 19.25 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 144 | 19.27 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 11 | 1 |
| 149 | 19.28 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 169 | 19.29 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 170 | 19.29 | wind | 1.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 185 | 19.31 | temperature | 30.0 | 10 | > th | dose independent | rect. | 11 | 1 |
| 186 | 19.31 | temperature | 30.0 | 90 | > th | dose independent | rect. | 11 | 1 |
| 219 | 19.37 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 5 | 23 |
| 222 | 19.37 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 225 | 19.38 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 348 | 19.58 | wind | 9.0 | 30 | < th | dose independent | rect. | 5 | 23 |
| 372 | 19.72 | temperature | 30.0 | 30 | > th | dose independent | rect. | 11 | 5 |
| 377 | 19.75 | temperature | 30.0 | 30 | > th | dose dependent | rect. | 13 | 1 |
| 422 | 19.83 | humidity | 90.0 | 10 | < th | dose independent | rect. | 24 | 6 |
| 424 | 19.83 | temperature | 30.0 | 10 | > th | dose dependent | sin | 7 | NA |
| 436 | 19.88 | temperature | 30.0 | 30 | > th | dose independent | sin | 7 | NA |
| 437 | 19.88 | temperature | 30.0 | 30 | > th | dose independent | sin | 5 | NA |
| 443 | 19.89 | temperature | 30.0 | 30 | > th | dose independent | sin | 3 | NA |
| 518 | 19.93 | humidity | 90.0 | 10 | < th | dose independent | rect. | 2 | 3 |
| 526 | 19.95 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 10 | 4 |
| 528 | 19.95 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 5 | 8 |
| 547 | 19.96 | humidity | 50.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 719 | 20.11 | temperature | 30.0 | 30 | < th | dose independent | sin | 7 | NA |
| 728 | 20.12 | temperature | 30.0 | 30 | < th | dose independent | sin | 4 | NA |
| 777 | 20.16 | temperature | 30.0 | 30 | < th | dose independent | rect. | 1 | 23 |
| 828 | 20.19 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 24 | 6 |
| 942 | 20.24 | humidity | 90.0 | 720 | < th | dose independent | rect. | 4 | 1 |
| 990 | 20.27 | radiation | 20.0 | 720 | < th | dose independent | rect. | 17 | 8 |