Os08g0120000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Succinate dehydrogenase iron-protein subunit (SDHB).
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Os08g0120000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Succinate dehydrogenase iron-protein subunit (SDHB).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.64 | 0.228 | 12.4 | 0.214 | 0.704 | -0.592 | 0.293 | 0.0891 | -0.0201 | 11.9 | 21.91 | 1860 | -- | -- |
| 23.54 | 0.226 | 12.4 | 0.206 | 0.702 | -0.604 | 0.294 | -- | -0.0294 | 11.9 | 21.7 | 1888 | -- | -- |
| 23.87 | 0.228 | 12.4 | 0.242 | 0.698 | -0.617 | -- | 0.0492 | -0.021 | 11.9 | 21.78 | 1902 | -- | -- |
| 23.88 | 0.228 | 12.4 | 0.229 | 0.698 | -0.619 | -- | -- | -0.0254 | 11.9 | 21.78 | 1906 | -- | -- |
| 47.46 | 0.321 | 12.4 | 0.157 | -- | -0.74 | -- | -0.153 | -0.0141 | -- | 21.83 | 869 | -- | -- |
| 35.68 | 0.28 | 12.4 | -0.062 | 0.719 | -- | 0.26 | -- | -0.22 | 11.8 | -- | -- | -- | -- |
| 35.98 | 0.281 | 12.4 | -0.0515 | 0.718 | -- | -- | -- | -0.219 | 11.8 | -- | -- | -- | -- |
| 45.86 | 0.315 | 12.4 | 0.153 | -- | -0.647 | -- | -- | 0.00366 | -- | 24.7 | 877 | -- | -- |
| 24.87 | 0.232 | 12.4 | -- | 0.703 | -0.532 | -- | -- | -0.0611 | 11.8 | 22.07 | 1856 | -- | -- |
| 68.44 | 0.387 | 12.5 | -0.0726 | -- | -- | -- | -- | -0.228 | -- | -- | -- | -- | -- |
| 36.05 | 0.281 | 12.4 | -- | 0.719 | -- | -- | -- | -0.213 | 11.8 | -- | -- | -- | -- |
| 46.19 | 0.317 | 12.4 | -- | -- | -0.717 | -- | -- | 0.0191 | -- | 24.86 | 902 | -- | -- |
| 68.58 | 0.387 | 12.5 | -- | -- | -- | -- | -- | -0.22 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.28 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 9 | 23.44 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 24 | 23.56 | wind | 9 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 27 | 23.56 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 7 |
| 29 | 23.58 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 7 |
| 91 | 23.80 | wind | 3 | 43200 | < th | dose dependent | rect. | 21 | 2 |
| 110 | 23.84 | wind | 9 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 111 | 23.84 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 156 | 23.93 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 2 |
| 163 | 23.94 | temperature | 25 | 1440 | < th | dose dependent | sin | 9 | NA |
| 188 | 23.99 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 216 | 24.05 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 277 | 24.16 | wind | 9 | 43200 | < th | dose independent | rect. | 9 | 7 |
| 279 | 24.16 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 314 | 24.23 | wind | 1 | 14400 | < th | dose dependent | rect. | 20 | 6 |
| 349 | 24.32 | wind | 1 | 14400 | < th | dose dependent | rect. | 19 | 12 |
| 359 | 24.34 | temperature | 25 | 270 | < th | dose dependent | rect. | 4 | 21 |
| 410 | 24.43 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 418 | 24.44 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 447 | 24.47 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 16 | 6 |
| 451 | 24.48 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 15 | 7 |
| 452 | 24.48 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 15 | 8 |
| 503 | 24.54 | wind | 9 | 43200 | > th | dose independent | sin | 22 | NA |
| 603 | 24.64 | temperature | 15 | 1440 | > th | dose dependent | sin | 11 | NA |
| 605 | 24.64 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 647 | 24.69 | radiation | 10 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 677 | 24.72 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 682 | 24.72 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 685 | 24.73 | radiation | 40 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 687 | 24.73 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 21 | 3 |
| 705 | 24.75 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 708 | 24.75 | humidity | 60 | 43200 | < th | dose independent | rect. | 20 | 14 |
| 710 | 24.75 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 743 | 24.78 | wind | 9 | 43200 | < th | dose independent | sin | 22 | NA |
| 751 | 24.78 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 18 |
| 767 | 24.79 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 768 | 24.80 | atmosphere | 1015 | 43200 | < th | dose independent | sin | 16 | NA |
| 769 | 24.80 | radiation | 20 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 806 | 24.82 | wind | 9 | 43200 | > th | dose independent | rect. | 9 | 15 |
| 816 | 24.83 | atmosphere | 1015 | 43200 | > th | dose independent | sin | 17 | NA |
| 818 | 24.83 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 850 | 24.85 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 877 | 24.87 | humidity | 90 | 14400 | < th | dose independent | rect. | 23 | 2 |
| 879 | 24.87 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 886 | 24.87 | wind | 7 | 43200 | > th | dose dependent | rect. | 10 | 4 |
| 926 | 24.89 | radiation | 10 | 43200 | < th | dose independent | rect. | 16 | 14 |
| 939 | 24.90 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 950 | 24.90 | radiation | 30 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 956 | 24.91 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 973 | 24.92 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 23 | 1 |