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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0118500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Auxin-induced SAUR-like protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.96 (0.0454) R2 : 0.00154
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0803 (0.0957) R2dN8 : 0.00199 R2N8 : 0.00154
σ : 0.856
deviance : 336.06
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
320.5 0.841 2.96 -0.254 0.138 1.01 0.655 -0.983 0.00839 14.5 0.3222 4271 -- --
320.31 0.834 2.94 -0.207 0.133 0.795 0.613 -- 0.0166 14.4 0.3694 6100 -- --
321.32 0.835 2.96 -0.232 0.141 1.02 -- -1.15 0.0153 14.5 0.3428 5343 -- --
321.08 0.835 2.94 -0.181 0.152 0.779 -- -- 0.0348 14.5 0.406 6773 -- --
321.91 0.836 2.99 -0.357 -- 1.46 -- -2.73 0.0344 -- 0.4275 5320 -- --
333.89 0.857 2.96 0.0172 0.139 -- 0.536 -- -0.0772 14.7 -- -- -- --
334.51 0.856 2.96 0.031 0.17 -- -- -- -0.0731 16.6 -- -- -- --
322.14 0.836 2.93 -0.198 -- 0.761 -- -- 0.0327 -- 0.4036 6775 -- --
321.55 0.835 2.93 -- 0.175 0.714 -- -- 0.0535 16.6 0.384 6769 -- --
336.05 0.857 2.96 0.0245 -- -- -- -- -0.0776 -- -- -- -- --
334.54 0.856 2.96 -- 0.169 -- -- -- -0.0766 16.6 -- -- -- --
323.09 0.837 2.94 -- -- 0.695 -- -- 0.031 -- 0.3804 6775 -- --
336.06 0.856 2.96 -- -- -- -- -- -0.0803 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 307.02 wind 7.0 270 > th dose independent rect. 12 1
2 307.21 wind 5.0 270 > th dose dependent rect. 12 1
6 312.60 wind 1.0 90 < th dose dependent rect. 4 1
7 312.61 wind 1.0 30 < th dose independent rect. 4 1
12 313.18 precipitation 0.1 10 > th dose independent rect. 3 1
16 313.18 precipitation 0.1 10 > th dose dependent rect. 3 1
32 316.25 wind 7.0 10 > th dose independent rect. 13 3
33 316.35 precipitation 0.1 4320 > th dose dependent rect. 20 22
36 316.69 precipitation 0.1 4320 > th dose dependent rect. 17 10
38 316.83 wind 1.0 90 < th dose dependent rect. 4 17
42 317.06 precipitation 0.1 4320 < th dose independent rect. 17 2
43 317.06 precipitation 0.1 4320 < th dose dependent rect. 17 2
46 317.19 wind 1.0 90 < th dose dependent rect. 4 12
48 317.22 wind 1.0 90 < th dose dependent rect. 4 10
49 317.24 wind 1.0 10 < th dose independent rect. 2 7
54 317.29 precipitation 0.1 4320 > th dose independent rect. 17 2
62 317.56 precipitation 0.1 4320 > th dose independent rect. 17 10
63 317.56 precipitation 0.1 4320 < th dose independent rect. 17 10
64 317.56 precipitation 0.1 4320 < th dose dependent rect. 17 10
65 317.63 wind 7.0 10 > th dose independent rect. 13 1
69 317.73 precipitation 0.1 4320 > th dose dependent rect. 17 3
70 317.88 wind 5.0 10 > th dose dependent rect. 13 3
72 317.99 precipitation 0.1 4320 > th dose dependent rect. 17 14
78 318.13 wind 1.0 10 < th dose dependent rect. 2 7
92 318.39 precipitation 0.1 4320 > th dose independent rect. 17 4
117 318.73 humidity 90.0 90 > th dose dependent rect. 18 1
123 318.85 temperature 20.0 10 < th dose independent rect. 19 1
129 318.88 humidity 90.0 90 > th dose independent rect. 18 1
131 318.89 temperature 20.0 10 < th dose dependent rect. 20 1
147 318.96 precipitation 0.1 4320 > th dose dependent rect. 13 6
194 319.39 precipitation 0.1 4320 > th dose dependent rect. 6 13
202 319.48 temperature 10.0 90 > th dose dependent rect. 3 23
210 319.55 temperature 25.0 90 < th dose dependent rect. 2 21
234 319.69 temperature 15.0 90 > th dose dependent rect. 21 23
248 319.78 temperature 30.0 30 < th dose dependent rect. 13 22
276 319.96 precipitation 0.1 4320 > th dose dependent sin 16 NA
282 319.99 precipitation 0.1 14400 > th dose independent rect. 19 4
287 320.01 precipitation 0.1 4320 > th dose dependent rect. 6 21
294 320.05 radiation 20.0 720 > th dose dependent rect. 6 1
308 320.06 precipitation 0.1 14400 < th dose independent rect. 19 3
310 320.06 precipitation 0.1 14400 < th dose dependent rect. 19 3
357 320.38 temperature 30.0 90 < th dose dependent rect. 7 23
367 320.41 wind 5.0 10 > th dose dependent rect. 13 1
377 320.47 precipitation 0.1 10 > th dose dependent rect. 3 15
384 320.48 precipitation 0.1 10 > th dose independent rect. 3 15
393 320.50 precipitation 0.1 4320 < th dose independent rect. 20 22
398 320.50 precipitation 0.1 4320 < th dose dependent rect. 20 22
406 320.52 precipitation 0.1 4320 > th dose independent rect. 20 22
419 320.59 temperature 25.0 1440 < th dose dependent rect. 10 2
447 320.70 temperature 20.0 270 > th dose dependent rect. 19 22
457 320.74 wind 1.0 10 < th dose independent rect. 24 5
460 320.75 temperature 30.0 90 < th dose dependent rect. 17 23
466 320.79 wind 1.0 10 > th dose independent rect. 21 13
471 320.80 precipitation 0.1 43200 > th dose dependent rect. 17 2
483 320.84 temperature 30.0 90 < th dose dependent rect. 23 23
517 321.00 precipitation 0.1 4320 > th dose dependent no NA NA
518 321.00 radiation 1.0 43200 < th dose dependent rect. 19 2
528 321.04 wind 1.0 10 < th dose independent rect. 24 9
530 321.04 precipitation 0.1 4320 > th dose dependent rect. 1 23
544 321.07 temperature 20.0 720 > th dose dependent rect. 19 20
551 321.09 wind 1.0 90 < th dose dependent rect. 11 10
585 321.17 temperature 30.0 30 < th dose dependent rect. 13 17
589 321.20 humidity 90.0 30 > th dose dependent rect. 15 5
592 321.21 temperature 15.0 90 > th dose dependent no NA NA
621 321.29 precipitation 0.1 4320 > th dose independent sin 15 NA
633 321.30 temperature 25.0 270 < th dose dependent rect. 11 2
648 321.34 wind 1.0 90 < th dose independent rect. 11 3
650 321.34 wind 1.0 90 < th dose dependent rect. 11 3
653 321.35 precipitation 0.1 4320 < th dose independent sin 15 NA
658 321.35 precipitation 0.1 4320 < th dose dependent sin 15 NA
682 321.40 wind 1.0 10 < th dose independent rect. 2 11
741 321.50 temperature 30.0 4320 < th dose independent rect. 15 1
759 321.56 precipitation 0.1 14400 > th dose independent rect. 20 1
764 321.58 humidity 80.0 90 < th dose independent rect. 2 2
768 321.59 precipitation 0.1 14400 < th dose independent rect. 20 1
771 321.59 precipitation 0.1 14400 < th dose dependent rect. 20 1
772 321.59 humidity 80.0 90 < th dose dependent rect. 2 2
778 321.60 humidity 90.0 10 < th dose dependent rect. 3 1
785 321.61 wind 5.0 14400 < th dose independent rect. 20 1
786 321.61 temperature 30.0 4320 > th dose independent rect. 15 1
804 321.62 temperature 20.0 1440 > th dose dependent rect. 3 9
822 321.65 temperature 20.0 90 > th dose dependent rect. 11 23
832 321.67 temperature 20.0 1440 > th dose dependent rect. 9 1
842 321.69 temperature 30.0 90 < th dose dependent no NA NA
849 321.70 temperature 20.0 1440 > th dose dependent rect. 8 3
868 321.73 wind 1.0 90 < th dose dependent rect. 11 6
871 321.74 wind 5.0 14400 > th dose independent rect. 20 1
878 321.74 temperature 25.0 90 < th dose dependent rect. 2 14
892 321.76 temperature 30.0 30 < th dose dependent rect. 5 23
922 321.81 temperature 10.0 1440 > th dose dependent rect. 9 1
931 321.82 wind 1.0 90 < th dose dependent sin 23 NA
938 321.82 temperature 10.0 720 > th dose dependent rect. 20 20
980 321.89 temperature 20.0 720 > th dose dependent rect. 12 21