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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0114200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to CEL5=CELLULASE 5 (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.12 (0.0271) R2 : 0.184
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 3.22 (0.318) R2dE : 0.185 R2E : 0.181
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0572 (0.0573) R2dN8 : 0.00233 R2N8 : -0.00152
σ : 0.509
deviance : 119.59
__
_____
C
peak time of C : --
E
wheather : wind
threshold : 1.085
memory length : 10
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 4.02
open length of G : 0.837

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
121.27 0.517 3.13 0.112 0.0278 2.04 -0.528 4.23 -0.0812 2.31 1 10 4.02 0.884
118.32 0.507 3.12 0.0416 0.0361 3.2 -0.562 -- -0.0547 2.6 1.068 9 4.02 0.851
120.26 0.511 3.11 0.0669 0.0202 2.64 -- 3.45 -0.0537 1.41 1.001 10 4.02 0.867
119.33 0.509 3.12 0.0655 0.0644 3.16 -- -- -0.048 5.61 1.084 10 4.02 0.833
119.98 0.51 3.13 0.0576 -- 2.8 -- 1.19 -0.0734 -- 1.176 10 4.02 0.866
143.9 0.562 3.11 0.0667 0.173 -- -0.546 -- -0.00322 4.09 -- -- -- --
144.62 0.563 3.1 0.0734 0.18 -- -- -- -0.000233 5.08 -- -- -- --
119.51 0.509 3.12 0.0573 -- 3.22 -- -- -0.0509 -- 1.082 10 4.02 0.835
119.4 0.509 3.12 -- 0.0612 3.18 -- -- -0.0578 5.84 1.081 10 4.02 0.836
146.32 0.565 3.11 0.0799 -- -- -- -- 0.00434 -- -- -- -- --
144.77 0.563 3.11 -- 0.181 -- -- -- -0.00841 5.07 -- -- -- --
119.59 0.509 3.12 -- -- 3.22 -- -- -0.0572 -- 1.085 10 4.02 0.837
146.49 0.565 3.11 -- -- -- -- -- -0.00452 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 128.11 wind 1.0 10 > th dose independent rect. 4 1
2 132.52 temperature 25.0 90 > th dose dependent rect. 2 3
3 132.56 temperature 25.0 90 > th dose independent rect. 1 4
7 132.77 temperature 25.0 270 > th dose independent rect. 1 1
11 133.02 temperature 25.0 270 > th dose dependent rect. 1 1
17 133.54 atmosphere 1005.0 30 > th dose dependent rect. 2 3
26 134.90 temperature 20.0 10 > th dose dependent rect. 2 3
32 135.28 wind 9.0 10 < th dose independent rect. 5 23
33 135.29 atmosphere 1005.0 10 > th dose independent rect. 4 1
35 135.40 atmosphere 1000.0 10 > th dose dependent rect. 4 1
36 135.42 temperature 20.0 10 > th dose dependent rect. 4 1
39 135.51 wind 5.0 10 < th dose independent rect. 4 1
43 135.54 radiation 1.0 10 < th dose dependent rect. 4 1
44 135.57 atmosphere 995.0 10 > th dose independent rect. 5 23
48 135.61 temperature 10.0 10 > th dose independent rect. 4 1
51 135.61 temperature 30.0 10 < th dose independent rect. 4 1
52 135.61 humidity 50.0 10 > th dose independent rect. 4 1
56 135.61 atmosphere 995.0 10 > th dose independent rect. 4 1
58 135.61 atmosphere 1010.0 10 < th dose independent rect. 4 1
60 135.61 radiation 1.0 10 < th dose independent rect. 4 1
65 135.61 temperature 10.0 10 > th dose independent rect. 5 23
70 135.62 precipitation 0.1 10 < th dose independent rect. 4 1
71 135.62 precipitation 0.1 10 < th dose dependent rect. 4 1
74 135.69 humidity 50.0 10 > th dose dependent rect. 4 1
77 135.82 wind 9.0 10 < th dose dependent rect. 4 1
81 135.93 precipitation 0.1 10 < th dose independent rect. 5 23
82 135.93 precipitation 0.1 10 < th dose dependent rect. 5 23
84 135.99 atmosphere 1015.0 10 < th dose dependent rect. 4 1
92 136.13 humidity 90.0 10 < th dose independent rect. 4 1
96 136.20 wind 7.0 1440 < th dose independent rect. 5 1
98 136.20 temperature 10.0 1440 > th dose independent rect. 5 1
101 136.20 temperature 30.0 1440 < th dose independent rect. 5 1
105 136.20 humidity 50.0 1440 > th dose independent rect. 5 1
114 136.20 atmosphere 995.0 1440 > th dose independent rect. 5 1
115 136.20 atmosphere 1015.0 1440 < th dose independent rect. 5 1
116 136.20 radiation 20.0 1440 < th dose independent rect. 5 1
125 136.20 temperature 10.0 1440 > th dose independent rect. 6 23
128 136.23 temperature 30.0 10 < th dose dependent rect. 4 1
137 136.43 humidity 90.0 90 < th dose dependent rect. 4 1
197 136.64 humidity 90.0 10 < th dose dependent rect. 4 1
202 136.70 atmosphere 1005.0 30 > th dose independent rect. 2 3
213 136.79 wind 1.0 30 > th dose dependent rect. 4 1
243 137.43 temperature 25.0 1440 < th dose independent rect. 1 1
252 137.52 wind 1.0 10 > th dose independent rect. 5 23
254 137.61 temperature 25.0 30 > th dose dependent rect. 21 1
274 137.99 humidity 80.0 4320 < th dose dependent rect. 1 1
286 138.17 temperature 25.0 30 < th dose independent rect. 2 1
291 138.18 wind 3.0 30 < th dose dependent rect. 2 1
295 138.19 wind 1.0 30 < th dose independent rect. 2 1
304 138.21 humidity 80.0 30 > th dose independent rect. 2 1
308 138.22 temperature 10.0 30 > th dose independent rect. 2 1
311 138.22 humidity 50.0 30 > th dose independent rect. 2 1
314 138.22 atmosphere 995.0 30 > th dose independent rect. 2 1
315 138.22 atmosphere 1010.0 30 < th dose independent rect. 2 1
317 138.22 radiation 1.0 30 < th dose independent rect. 2 1
322 138.22 precipitation 0.1 30 < th dose independent rect. 2 1
323 138.22 temperature 10.0 30 > th dose independent rect. 3 23
324 138.22 humidity 50.0 30 > th dose dependent rect. 2 1
327 138.22 radiation 1.0 30 < th dose dependent rect. 2 1
332 138.22 precipitation 0.1 30 < th dose dependent rect. 2 1
333 138.22 radiation 20.0 10 < th dose dependent rect. 5 23
334 138.23 atmosphere 1005.0 30 > th dose independent rect. 2 1
335 138.24 radiation 20.0 30 > th dose independent rect. 15 1
359 138.28 wind 3.0 30 < th dose independent rect. 2 3
362 138.31 radiation 1.0 10 < th dose dependent rect. 4 8
365 138.33 atmosphere 1015.0 30 < th dose dependent rect. 2 1
367 138.34 humidity 50.0 10 > th dose independent rect. 5 23
369 138.36 temperature 30.0 10 > th dose independent rect. 15 1
371 138.38 temperature 30.0 30 < th dose dependent rect. 2 1
381 138.46 wind 1.0 30 > th dose independent rect. 2 3
398 138.57 wind 7.0 30 < th dose independent rect. 5 21
399 138.57 radiation 20.0 10 < th dose dependent rect. 5 21
406 138.66 wind 9.0 30 < th dose independent rect. 3 23
407 138.67 wind 1.0 30 > th dose independent rect. 2 1
412 138.68 temperature 10.0 30 > th dose dependent rect. 5 21
432 138.78 temperature 15.0 30 > th dose independent rect. 5 21
434 138.79 radiation 20.0 30 > th dose dependent rect. 15 17
467 138.92 radiation 10.0 10 < th dose independent rect. 5 23
473 138.95 humidity 60.0 270 < th dose independent rect. 18 1
478 138.96 radiation 10.0 10 < th dose independent rect. 5 21
486 138.97 humidity 60.0 270 < th dose dependent rect. 18 1
511 138.98 wind 7.0 30 < th dose dependent rect. 2 3
535 139.04 precipitation 0.1 10 < th dose independent rect. 2 3
538 139.04 precipitation 0.1 10 < th dose dependent rect. 2 3
548 139.08 humidity 80.0 4320 < th dose independent rect. 1 1
552 139.09 humidity 80.0 30 > th dose independent rect. 2 3
553 139.09 temperature 30.0 30 < th dose independent rect. 5 23
556 139.11 radiation 20.0 30 > th dose dependent rect. 15 1
579 139.15 radiation 1.0 10 < th dose independent rect. 4 8
585 139.17 atmosphere 995.0 30 > th dose independent rect. 5 21
591 139.20 temperature 10.0 30 > th dose independent rect. 2 3
593 139.20 temperature 30.0 30 < th dose independent rect. 2 3
594 139.20 humidity 50.0 30 > th dose independent rect. 2 3
598 139.20 atmosphere 1010.0 30 < th dose independent rect. 2 3
600 139.20 radiation 1.0 30 < th dose independent rect. 2 3
607 139.20 radiation 10.0 30 < th dose dependent rect. 2 3
621 139.23 humidity 80.0 4320 > th dose independent rect. 1 1
628 139.24 humidity 70.0 4320 > th dose dependent rect. 2 1
661 139.28 wind 1.0 10 > th dose independent rect. 16 12
663 139.31 precipitation 0.1 30 < th dose independent rect. 5 21
666 139.31 precipitation 0.1 30 < th dose dependent rect. 5 21
667 139.31 temperature 10.0 10 > th dose dependent rect. 5 23
673 139.34 radiation 1.0 10 < th dose dependent rect. 2 10
701 139.44 wind 9.0 30 < th dose dependent rect. 5 21
731 139.54 humidity 90.0 270 < th dose independent rect. 1 1
734 139.55 temperature 30.0 270 > th dose dependent rect. 18 1
768 139.61 radiation 1.0 10 < th dose independent rect. 2 10
770 139.61 wind 1.0 90 > th dose independent rect. 2 14
785 139.65 humidity 50.0 30 > th dose dependent rect. 2 3
787 139.67 temperature 15.0 30 > th dose independent rect. 16 10
824 139.75 atmosphere 1015.0 10 < th dose independent rect. 5 23
877 139.77 radiation 20.0 10 < th dose dependent rect. 14 12
889 139.80 radiation 30.0 10 < th dose dependent rect. 16 10
892 139.81 precipitation 0.1 30 < th dose independent rect. 2 14
893 139.81 humidity 50.0 30 > th dose independent rect. 5 21
900 139.81 precipitation 0.1 30 < th dose dependent rect. 2 14
949 139.89 temperature 10.0 1440 > th dose independent rect. 17 10
952 139.89 radiation 30.0 1440 < th dose independent rect. 17 10
958 139.89 temperature 10.0 1440 > th dose independent rect. 3 14
965 139.90 radiation 20.0 10 < th dose independent rect. 16 10
966 139.90 wind 3.0 1440 < th dose dependent rect. 2 1
975 139.92 temperature 25.0 720 > th dose independent rect. 17 12
986 139.95 wind 5.0 10 < th dose dependent rect. 20 9
995 139.98 radiation 10.0 10 < th dose independent rect. 14 12
1000 139.99 wind 9.0 30 < th dose independent rect. 16 10