Os08g0114000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0114000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.63 | 0.334 | 8.72 | 0.0418 | 0.936 | 0.765 | 0.122 | 0.715 | -0.0592 | 20.5 | 25.3 | 3156 | -- | -- |
| 51.04 | 0.333 | 8.7 | 0.151 | 0.933 | 0.619 | 0.13 | -- | -0.0721 | 20.6 | 33.21 | 2916 | -- | -- |
| 50.66 | 0.332 | 8.72 | 0.0331 | 0.933 | 0.763 | -- | 0.722 | -0.0606 | 20.5 | 25.3 | 3087 | -- | -- |
| 51.09 | 0.333 | 8.7 | 0.138 | 0.935 | 0.617 | -- | -- | -0.0729 | 20.6 | 33 | 2916 | -- | -- |
| 98.64 | 0.465 | 8.69 | -0.0973 | -- | 0.715 | -- | 0.814 | -0.11 | -- | 25.1 | 2953 | -- | -- |
| 58.73 | 0.359 | 8.73 | -0.118 | 0.933 | -- | 0.102 | -- | -0.202 | 20.5 | -- | -- | -- | -- |
| 58.76 | 0.359 | 8.73 | -0.121 | 0.934 | -- | -- | -- | -0.202 | 20.4 | -- | -- | -- | -- |
| 99.3 | 0.464 | 8.67 | 0.183 | -- | 0.713 | -- | -- | -0.0307 | -- | 25.3 | 2939 | -- | -- |
| 51.5 | 0.334 | 8.71 | -- | 0.934 | 0.556 | -- | -- | -0.1 | 20.6 | 60.04 | 2886 | -- | -- |
| 107.42 | 0.484 | 8.71 | -0.125 | -- | -- | -- | -- | -0.212 | -- | -- | -- | -- | -- |
| 59.14 | 0.36 | 8.73 | -- | 0.934 | -- | -- | -- | -0.189 | 20.4 | -- | -- | -- | -- |
| 99.87 | 0.467 | 8.68 | -- | -- | 0.646 | -- | -- | -0.0853 | -- | 25.3 | 2939 | -- | -- |
| 107.83 | 0.485 | 8.7 | -- | -- | -- | -- | -- | -0.198 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 48.69 | temperature | 15 | 10 | > th | dose dependent | rect. | 5 | 20 |
| 2 | 48.73 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 2 |
| 35 | 50.18 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 2 |
| 36 | 50.24 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 40 | 50.28 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 56 | 50.44 | radiation | 1 | 43200 | < th | dose dependent | rect. | 21 | 3 |
| 61 | 50.47 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 19 |
| 63 | 50.49 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 12 |
| 80 | 50.56 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 7 |
| 98 | 50.62 | temperature | 25 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 123 | 50.68 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 7 |
| 124 | 50.68 | temperature | 10 | 4320 | > th | dose dependent | rect. | 20 | 8 |
| 132 | 50.69 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 5 |
| 154 | 50.71 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 5 |
| 165 | 50.71 | temperature | 10 | 270 | > th | dose dependent | rect. | 2 | 21 |
| 180 | 50.72 | temperature | 25 | 4320 | < th | dose dependent | rect. | 17 | 12 |
| 184 | 50.72 | temperature | 25 | 4320 | < th | dose dependent | rect. | 13 | 17 |
| 206 | 50.74 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 252 | 50.76 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 301 | 50.79 | temperature | 25 | 4320 | < th | dose dependent | sin | 14 | NA |
| 340 | 50.81 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 411 | 50.84 | wind | 1 | 1440 | < th | dose independent | rect. | 3 | 2 |
| 431 | 50.85 | temperature | 10 | 4320 | > th | dose dependent | sin | 12 | NA |
| 781 | 50.99 | temperature | 10 | 4320 | > th | dose dependent | rect. | 5 | 2 |
| 819 | 51.00 | radiation | 1 | 4320 | > th | dose dependent | rect. | 18 | 12 |
| 912 | 51.04 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 12 |
| 931 | 51.05 | wind | 1 | 4320 | < th | dose dependent | rect. | 4 | 2 |
| 962 | 51.06 | radiation | 40 | 4320 | < th | dose dependent | rect. | 2 | 4 |