Os08g0113900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0113900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 185.11 | 0.639 | 3.86 | 1.83 | 1.14 | 1.52 | 1.02 | 2.14 | 0.782 | 0.125 | 83.35 | 99 | -- | -- |
| 196.72 | 0.653 | 3.84 | 2 | 1.23 | 1.5 | 1.79 | -- | 0.839 | 0.298 | 84.23 | 92 | -- | -- |
| 188.3 | 0.639 | 3.85 | 1.78 | 1.07 | 1.56 | -- | 2.67 | 0.786 | 0.0326 | 82.72 | 93 | -- | -- |
| 211.56 | 0.677 | 3.86 | 1.88 | 1.25 | 1.68 | -- | -- | 0.854 | 0.257 | 86.73 | 99 | -- | -- |
| 223.48 | 0.7 | 3.85 | 1.87 | -- | 2 | -- | 2.68 | 0.771 | -- | 75.57 | 32 | -- | -- |
| 258.6 | 0.754 | 3.92 | 2.14 | 1.98 | -- | 2.83 | -- | 0.552 | 1.73 | -- | -- | -- | -- |
| 290.13 | 0.798 | 3.93 | 2.05 | 1.98 | -- | -- | -- | 0.535 | 1.77 | -- | -- | -- | -- |
| 250.95 | 0.738 | 3.85 | 1.99 | -- | 2.11 | -- | -- | 0.809 | -- | 75.56 | 15 | -- | -- |
| 303.25 | 0.811 | 3.91 | -- | 1.22 | 1.88 | -- | -- | 0.675 | 24 | 86.64 | 108 | -- | -- |
| 527.75 | 1.07 | 3.91 | 2.13 | -- | -- | -- | -- | 0.58 | -- | -- | -- | -- | -- |
| 401.01 | 0.937 | 3.98 | -- | 2.02 | -- | -- | -- | 0.307 | 1.8 | -- | -- | -- | -- |
| 348.7 | 0.87 | 3.87 | -- | -- | 2.28 | -- | -- | 0.721 | -- | 81.27 | 11 | -- | -- |
| 647.64 | 1.19 | 3.96 | -- | -- | -- | -- | -- | 0.343 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 170.92 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 2 | 172.30 | temperature | 20.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 3 | 173.78 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 3 | 3 |
| 5 | 174.73 | temperature | 20.0 | 10 | > th | dose independent | rect. | 3 | 3 |
| 7 | 175.69 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 8 | 177.56 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 11 | 178.59 | wind | 3.0 | 90 | < th | dose dependent | rect. | 3 | 2 |
| 16 | 180.70 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 25 | 182.00 | wind | 3.0 | 270 | < th | dose dependent | rect. | 24 | 5 |
| 26 | 182.04 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 28 | 182.27 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 1 | 22 |
| 30 | 182.66 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 3 | 14 |
| 32 | 182.98 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 3 | 16 |
| 35 | 183.13 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 9 | 22 |
| 37 | 183.14 | humidity | 80.0 | 90 | > th | dose dependent | sin | 7 | NA |
| 43 | 183.70 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 3 | 18 |
| 83 | 185.88 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 3 | 20 |
| 91 | 186.15 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 118 | 187.22 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 17 | 23 |
| 122 | 187.48 | humidity | 80.0 | 90 | > th | dose dependent | no | NA | NA |
| 124 | 187.54 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 130 | 187.65 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 132 | 187.74 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 3 | 2 |
| 158 | 188.58 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 170 | 188.82 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 204 | 189.61 | wind | 3.0 | 270 | < th | dose independent | rect. | 24 | 5 |
| 205 | 189.69 | humidity | 90.0 | 90 | > th | dose independent | rect. | 1 | 22 |
| 225 | 190.15 | humidity | 90.0 | 90 | < th | dose independent | sin | 6 | NA |
| 330 | 191.77 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 5 | 22 |
| 331 | 191.77 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 5 | 22 |
| 367 | 192.09 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 24 | 5 |
| 464 | 192.91 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 17 | 19 |
| 481 | 193.07 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 17 | 17 |
| 507 | 193.19 | humidity | 80.0 | 90 | > th | dose independent | rect. | 3 | 2 |
| 537 | 193.51 | humidity | 90.0 | 90 | > th | dose independent | rect. | 3 | 20 |
| 547 | 193.58 | wind | 3.0 | 90 | < th | dose independent | rect. | 3 | 2 |
| 563 | 193.79 | humidity | 90.0 | 90 | < th | dose independent | rect. | 19 | 23 |
| 566 | 193.84 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 616 | 194.13 | temperature | 20.0 | 270 | > th | dose independent | rect. | 24 | 21 |
| 643 | 194.34 | humidity | 90.0 | 90 | > th | dose independent | rect. | 3 | 18 |
| 709 | 195.03 | temperature | 20.0 | 270 | > th | dose independent | rect. | 11 | 18 |
| 759 | 195.43 | humidity | 90.0 | 90 | < th | dose independent | rect. | 21 | 14 |
| 767 | 195.45 | temperature | 20.0 | 270 | > th | dose independent | rect. | 10 | 20 |
| 778 | 195.55 | humidity | 90.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 822 | 195.91 | temperature | 20.0 | 10 | > th | dose independent | rect. | 24 | 6 |
| 894 | 196.28 | temperature | 20.0 | 270 | > th | dose independent | rect. | 24 | 19 |
| 966 | 196.69 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 2 |
| 967 | 196.69 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 2 |
| 975 | 196.72 | radiation | 1.0 | 90 | < th | dose independent | rect. | 3 | 14 |