Os08g0113700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0113700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 765.58 | 1.3 | 8.22 | 0.468 | 4.39 | 7.27 | -2.15 | -1.72 | 0.581 | 8.48 | 1.29 | 82 | 9.37 | -- |
| 766.73 | 1.29 | 8.21 | 0.334 | 4.51 | 7.38 | -0.393 | -- | 0.564 | 8.67 | 1.67 | 78 | 9.17 | -- |
| 767.01 | 1.29 | 8.23 | 0.337 | 4.43 | 7.28 | -- | -0.301 | 0.544 | 8.52 | 1.66 | 77 | 9.26 | -- |
| 766.13 | 1.29 | 8.22 | 0.367 | 4.44 | 7.28 | -- | -- | 0.568 | 8.57 | 1.29 | 76 | 9.22 | -- |
| 1153.24 | 1.58 | 8.39 | 0.0948 | -- | 4.43 | -- | -0.3 | 0.488 | -- | 10.72 | 184 | 7.84 | -- |
| 1359.43 | 1.73 | 8.44 | -0.0442 | 4.47 | -- | -1.19 | -- | 0.326 | 1.5 | -- | -- | -- | -- |
| 1365.09 | 1.73 | 8.44 | -0.00436 | 4.47 | -- | -- | -- | 0.333 | 1.49 | -- | -- | -- | -- |
| 1128.51 | 1.56 | 8.38 | 0.131 | -- | 4.39 | -- | -- | 0.539 | -- | 0.8592 | 88 | 7.37 | -- |
| 767.83 | 1.29 | 8.23 | -- | 4.49 | 7.33 | -- | -- | 0.518 | 8.69 | 1.344 | 74 | 9.1 | -- |
| 2589.71 | 2.38 | 8.38 | 0.174 | -- | -- | -- | -- | 0.429 | -- | -- | -- | -- | -- |
| 1365.09 | 1.73 | 8.44 | -- | 4.47 | -- | -- | -- | 0.334 | 1.49 | -- | -- | -- | -- |
| 1127.88 | 1.56 | 8.35 | -- | -- | 4.28 | -- | -- | 0.552 | -- | 0.87 | 89 | 7.21 | -- |
| 2590.51 | 2.38 | 8.38 | -- | -- | -- | -- | -- | 0.41 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 773.28 | radiation | 1.0 | 90 | < th | dose independent | sin | 15 | NA |
| 2 | 775.22 | radiation | 1.0 | 90 | > th | dose independent | sin | 15 | NA |
| 4 | 781.20 | radiation | 1.0 | 90 | < th | dose dependent | sin | 16 | NA |
| 14 | 827.61 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 4 | 14 |
| 22 | 844.64 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 3 |
| 23 | 845.42 | radiation | 1.0 | 90 | > th | dose independent | rect. | 15 | 15 |
| 31 | 859.44 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 5 | 14 |
| 34 | 862.80 | radiation | 1.0 | 90 | > th | dose independent | rect. | 15 | 4 |
| 54 | 879.61 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 14 | 1 |
| 55 | 881.66 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 15 | 3 |
| 59 | 887.98 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 12 |
| 98 | 908.95 | temperature | 25.0 | 90 | > th | dose independent | rect. | 15 | 3 |
| 113 | 917.62 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 114 | 917.86 | radiation | 1.0 | 90 | < th | dose independent | rect. | 17 | 10 |
| 117 | 918.84 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 3 |
| 121 | 919.98 | radiation | 1.0 | 90 | < th | dose independent | rect. | 10 | 17 |
| 134 | 924.23 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 12 | 5 |
| 136 | 924.52 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 7 | 20 |
| 137 | 925.22 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 10 | 17 |
| 140 | 925.44 | humidity | 90.0 | 90 | < th | dose independent | rect. | 15 | 3 |
| 145 | 926.21 | radiation | 1.0 | 90 | < th | dose independent | rect. | 15 | 12 |
| 152 | 927.58 | radiation | 40.0 | 270 | < th | dose dependent | sin | 16 | NA |
| 154 | 928.03 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 17 | 10 |
| 161 | 930.33 | radiation | 1.0 | 270 | > th | dose dependent | sin | 15 | NA |
| 162 | 930.64 | radiation | 1.0 | 90 | < th | dose independent | rect. | 5 | 23 |
| 163 | 931.18 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 15 | 12 |
| 165 | 931.41 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 13 | 5 |
| 177 | 931.53 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 13 | 17 |
| 185 | 932.69 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 14 | 1 |
| 192 | 934.63 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 14 | 1 |
| 201 | 936.45 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 15 | 3 |
| 202 | 936.45 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 15 | 3 |
| 214 | 938.40 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 15 | 3 |
| 220 | 939.56 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 15 | 4 |
| 224 | 939.56 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 19 | 20 |
| 227 | 940.00 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 12 |
| 234 | 941.59 | radiation | 1.0 | 270 | > th | dose independent | rect. | 14 | 1 |
| 236 | 941.65 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 14 | 5 |
| 237 | 941.69 | radiation | 20.0 | 270 | > th | dose independent | rect. | 13 | 4 |
| 252 | 941.82 | radiation | 30.0 | 270 | > th | dose independent | sin | 14 | NA |
| 264 | 942.11 | temperature | 30.0 | 90 | < th | dose independent | rect. | 18 | 21 |
| 269 | 942.64 | wind | 3.0 | 270 | > th | dose independent | rect. | 14 | 1 |
| 272 | 942.92 | humidity | 60.0 | 90 | > th | dose independent | rect. | 18 | 9 |
| 282 | 946.08 | temperature | 25.0 | 270 | > th | dose independent | rect. | 14 | 1 |
| 284 | 946.52 | radiation | 30.0 | 270 | < th | dose independent | sin | 14 | NA |
| 316 | 947.93 | radiation | 30.0 | 270 | > th | dose independent | rect. | 14 | 2 |
| 335 | 948.88 | temperature | 30.0 | 90 | < th | dose independent | rect. | 18 | 9 |
| 345 | 949.85 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 12 | 7 |
| 434 | 953.86 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 1 |
| 435 | 953.86 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 1 |
| 450 | 955.77 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 1 |
| 451 | 955.84 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 1 |
| 453 | 955.84 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 14 | 1 |
| 455 | 955.84 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 23 |
| 459 | 956.41 | humidity | 80.0 | 270 | < th | dose independent | rect. | 14 | 1 |
| 502 | 957.73 | wind | 1.0 | 90 | > th | dose independent | rect. | 15 | 3 |
| 517 | 958.83 | wind | 1.0 | 270 | > th | dose dependent | rect. | 14 | 1 |
| 520 | 959.01 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 18 | 21 |
| 521 | 959.07 | humidity | 50.0 | 270 | > th | dose independent | rect. | 16 | 21 |
| 525 | 959.21 | wind | 9.0 | 90 | < th | dose independent | rect. | 15 | 3 |
| 534 | 959.73 | radiation | 40.0 | 90 | < th | dose independent | rect. | 15 | 3 |
| 538 | 960.22 | temperature | 10.0 | 90 | > th | dose independent | rect. | 15 | 3 |
| 540 | 960.22 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 15 | 3 |
| 542 | 960.22 | temperature | 10.0 | 90 | > th | dose independent | rect. | 18 | 21 |
| 584 | 961.71 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 15 |
| 585 | 961.71 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 15 |
| 607 | 964.09 | humidity | 50.0 | 270 | > th | dose independent | rect. | 14 | 1 |
| 616 | 965.10 | temperature | 15.0 | 30 | > th | dose independent | rect. | 19 | 19 |
| 622 | 966.22 | humidity | 60.0 | 720 | > th | dose independent | rect. | 17 | 10 |
| 671 | 968.37 | temperature | 30.0 | 10 | < th | dose independent | rect. | 18 | 11 |
| 679 | 968.93 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 16 | 14 |
| 692 | 970.26 | wind | 1.0 | 10 | > th | dose dependent | rect. | 14 | 5 |
| 709 | 971.23 | wind | 9.0 | 90 | < th | dose independent | rect. | 18 | 21 |
| 781 | 976.99 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 12 | 5 |
| 819 | 979.70 | wind | 1.0 | 90 | > th | dose independent | rect. | 18 | 21 |
| 852 | 981.11 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 17 | 3 |
| 869 | 982.06 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 17 | 2 |
| 915 | 983.89 | temperature | 30.0 | 270 | < th | dose independent | rect. | 6 | 14 |
| 916 | 983.93 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 18 | 21 |
| 922 | 984.47 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 16 | 3 |
| 952 | 986.75 | humidity | 90.0 | 30 | < th | dose independent | rect. | 12 | 7 |
| 958 | 987.77 | wind | 9.0 | 90 | < th | dose independent | rect. | 3 | 15 |