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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0112900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Lipolytic enzyme, G-D-S-L family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3 (0.0235) R2 : 0.00345
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0623 (0.0495) R2dN8 : 0.00446 R2N8 : 0.00345
σ : 0.443
deviance : 90.14
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
81.5 0.424 3.05 0.115 0.15 2.08 -0.808 7.35 0.0631 4.47 9.598 1181 -- --
84.76 0.429 3 -0.0154 0.132 0.544 -0.673 -- 0.0677 3.54 7.919 1098 -- --
83.25 0.425 3.05 0.122 0.146 2.08 -- 7.27 0.0683 4.8 9.656 1180 -- --
85.94 0.432 3 -0.0195 0.147 0.572 -- -- 0.0832 4.15 10.2 1090 -- --
83.81 0.426 3.04 0.162 -- 2.61 -- 9.74 0.088 -- 10.4 1085 -- --
86.86 0.437 3.01 -0.091 0.158 -- -0.822 -- 0.0452 4.33 -- -- -- --
88.72 0.441 3.01 -0.0836 0.153 -- -- -- 0.0496 4.37 -- -- -- --
87.05 0.435 3 -0.0112 -- 0.624 -- -- 0.0826 -- 10.22 1084 -- --
85.89 0.432 3 -- 0.149 0.619 -- -- 0.0819 4.76 10.24 1090 -- --
89.98 0.443 3.01 -0.0776 -- -- -- -- 0.0537 -- -- -- -- --
88.9 0.441 3 -- 0.151 -- -- -- 0.0589 4.38 -- -- -- --
87.05 0.435 3 -- -- 0.628 -- -- 0.0841 -- 10.21 1080 -- --
90.14 0.443 3 -- -- -- -- -- 0.0623 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 74.49 temperature 20.0 10 > th dose independent rect. 2 1
2 75.19 temperature 15.0 10 > th dose dependent rect. 2 1
5 75.24 humidity 80.0 10 > th dose independent rect. 2 1
6 75.24 atmosphere 1010.0 30 < th dose dependent rect. 2 1
9 75.32 wind 1.0 30 > th dose independent rect. 2 1
10 75.33 temperature 20.0 10 > th dose independent rect. 1 3
12 75.41 humidity 80.0 30 > th dose dependent rect. 2 1
14 75.43 temperature 25.0 30 < th dose independent rect. 2 1
17 75.45 atmosphere 1000.0 30 > th dose independent rect. 2 1
18 75.46 wind 9.0 30 < th dose independent rect. 2 1
19 75.46 temperature 10.0 30 > th dose independent rect. 2 1
22 75.46 humidity 50.0 30 > th dose independent rect. 2 1
26 75.46 atmosphere 1010.0 30 < th dose independent rect. 2 1
28 75.46 radiation 1.0 30 < th dose independent rect. 2 1
33 75.46 precipitation 0.1 30 < th dose independent rect. 2 1
34 75.46 temperature 10.0 30 > th dose independent rect. 3 23
35 75.46 radiation 1.0 30 < th dose dependent rect. 2 1
40 75.46 precipitation 0.1 30 < th dose dependent rect. 2 1
43 75.54 wind 3.0 30 < th dose independent rect. 2 1
51 75.64 temperature 30.0 30 < th dose dependent rect. 2 1
52 75.64 atmosphere 995.0 30 > th dose dependent rect. 2 1
53 75.66 wind 9.0 30 < th dose dependent rect. 2 1
107 76.64 radiation 1.0 4320 < th dose dependent rect. 3 1
128 77.25 wind 9.0 1440 < th dose independent rect. 3 1
129 77.25 temperature 10.0 1440 > th dose independent rect. 3 1
132 77.25 temperature 30.0 1440 < th dose independent rect. 3 1
136 77.25 humidity 50.0 1440 > th dose independent rect. 3 1
145 77.25 atmosphere 995.0 1440 > th dose independent rect. 3 1
146 77.25 radiation 1.0 1440 < th dose independent rect. 3 1
166 77.25 temperature 10.0 1440 > th dose independent rect. 4 23
179 77.40 atmosphere 995.0 10 > th dose independent rect. 3 23
184 77.60 wind 9.0 30 < th dose independent rect. 3 23
191 78.00 precipitation 0.1 30 < th dose independent rect. 3 23
192 78.00 precipitation 0.1 30 < th dose dependent rect. 3 23
215 79.26 temperature 30.0 90 < th dose independent rect. 3 22
216 79.29 wind 1.0 10 < th dose independent rect. 2 6
221 79.35 wind 1.0 90 < th dose independent rect. 22 5
297 79.85 wind 1.0 30 < th dose independent rect. 10 18
324 80.02 wind 1.0 90 < th dose independent rect. 14 13
325 80.03 precipitation 0.1 270 > th dose independent rect. 2 2
327 80.03 precipitation 0.1 270 > th dose dependent rect. 2 2
361 80.39 wind 1.0 30 > th dose dependent rect. 2 1
379 80.49 wind 5.0 10 > th dose independent rect. 1 7
384 80.50 wind 5.0 30 > th dose dependent rect. 1 7
401 80.61 wind 1.0 90 > th dose independent rect. 3 22
408 80.70 wind 1.0 90 < th dose dependent rect. 22 5
418 80.79 wind 9.0 720 > th dose independent rect. 19 3
419 80.79 wind 9.0 720 > th dose dependent rect. 19 2
430 80.83 wind 9.0 720 > th dose independent rect. 20 1
458 80.95 humidity 50.0 90 > th dose independent rect. 3 22
482 80.98 temperature 15.0 270 > th dose dependent rect. 23 4
516 81.06 wind 5.0 10 < th dose independent rect. 4 6
531 81.08 humidity 90.0 10 < th dose independent rect. 16 18
558 81.14 humidity 90.0 10 > th dose independent rect. 22 6
559 81.14 humidity 70.0 10 > th dose dependent rect. 1 3
570 81.15 humidity 80.0 10 > th dose dependent rect. 22 6
594 81.26 temperature 25.0 10 < th dose independent rect. 24 4
598 81.28 wind 9.0 10 < th dose dependent rect. 4 6
610 81.35 wind 3.0 30 < th dose dependent rect. 10 18
616 81.37 wind 7.0 270 > th dose dependent rect. 23 6
629 81.40 wind 1.0 10 < th dose independent rect. 2 16
633 81.40 atmosphere 1000.0 10 > th dose independent rect. 4 21
635 81.41 wind 1.0 10 < th dose independent rect. 2 14
667 81.52 wind 5.0 270 > th dose dependent rect. 1 1
679 81.54 wind 5.0 270 > th dose independent rect. 1 1
684 81.55 wind 5.0 90 > th dose independent rect. 1 4
688 81.55 wind 1.0 90 < th dose dependent rect. 14 13
693 81.58 wind 7.0 270 > th dose independent rect. 23 6
721 81.63 atmosphere 1015.0 10 < th dose independent rect. 10 18
766 81.66 wind 1.0 90 < th dose dependent rect. 11 16
775 81.68 humidity 80.0 10 > th dose dependent rect. 20 8
776 81.69 precipitation 0.1 10 < th dose independent rect. 1 3
778 81.69 precipitation 0.1 10 < th dose dependent rect. 1 3
785 81.71 temperature 15.0 10 > th dose independent rect. 10 18
817 81.74 precipitation 0.1 30 > th dose independent rect. 3 3
822 81.74 precipitation 0.1 10 < th dose independent rect. 4 6
832 81.74 precipitation 0.1 30 > th dose dependent rect. 3 3
839 81.74 precipitation 0.1 10 < th dose dependent rect. 4 6
897 81.78 humidity 50.0 10 > th dose independent rect. 10 18
915 81.79 atmosphere 1015.0 10 < th dose dependent rect. 10 18
933 81.81 temperature 10.0 10 > th dose independent rect. 4 6
935 81.81 humidity 50.0 10 > th dose independent rect. 4 6
936 81.81 atmosphere 995.0 10 > th dose independent rect. 4 6
937 81.81 atmosphere 1015.0 10 < th dose independent rect. 4 6
956 81.83 wind 5.0 10 < th dose independent rect. 17 17