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Os08g0112600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.5 (0.017) R2 : 0.187
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.366 (0.0358) R2dN8 : 0.241 R2N8 : 0.187
σ : 0.32
deviance : 46.99
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
23.64 0.228 13.5 -0.127 0.626 0.268 -0.0359 1.27 -0.382 19.9 15.86 114 -- --
25.79 0.238 13.5 -0.118 0.643 0.208 -0.307 -- -0.367 19.9 7.334 90 -- --
23.64 0.226 13.5 -0.126 0.626 0.267 -- 1.28 -0.382 19.9 15.54 113 -- --
26.05 0.239 13.5 -0.109 0.641 0.19 -- -- -0.367 19.8 7.334 90 -- --
34.14 0.272 13.5 -0.115 -- 0.568 -- 1.17 -0.378 -- 0.005918 804 -- --
26.51 0.241 13.5 -0.111 0.613 -- -0.231 -- -0.369 19.4 -- -- -- --
26.65 0.242 13.5 -0.105 0.614 -- -- -- -0.369 19.3 -- -- -- --
32.28 0.265 13.5 -0.155 -- 0.627 -- -- -0.446 -- -33.36 829 -- --
26.37 0.24 13.5 -- 0.641 0.186 -- -- -0.355 19.8 7.334 90 -- --
46.64 0.319 13.5 -0.115 -- -- -- -- -0.379 -- -- -- -- --
26.94 0.243 13.5 -- 0.615 -- -- -- -0.357 19.3 -- -- -- --
32.91 0.267 13.5 -- -- 0.62 -- -- -0.429 -- -28.06 833 -- --
46.99 0.32 13.5 -- -- -- -- -- -0.366 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 21.68 wind 7.0 270 < th dose independent rect. 5 22
3 21.94 temperature 15.0 30 > th dose dependent rect. 8 6
9 22.03 wind 9.0 270 < th dose dependent rect. 15 10
11 22.06 wind 7.0 90 < th dose independent rect. 8 19
16 22.12 temperature 20.0 270 > th dose dependent rect. 8 2
18 22.15 wind 5.0 270 < th dose independent rect. 16 10
19 22.16 temperature 10.0 90 > th dose dependent rect. 8 19
22 22.18 temperature 15.0 270 > th dose dependent rect. 6 6
23 22.19 radiation 1.0 270 > th dose independent sin 2 NA
25 22.20 humidity 50.0 270 > th dose independent rect. 14 16
28 22.21 wind 9.0 270 < th dose dependent rect. 6 20
36 22.25 radiation 1.0 270 < th dose independent rect. 3 5
43 22.27 radiation 1.0 270 < th dose dependent rect. 3 5
50 22.29 radiation 1.0 270 < th dose independent rect. 3 13
52 22.29 radiation 1.0 270 < th dose dependent rect. 3 14
69 22.34 radiation 1.0 270 < th dose independent sin 2 NA
73 22.35 atmosphere 1010.0 90 < th dose independent rect. 3 5
82 22.36 humidity 50.0 90 > th dose independent rect. 14 18
85 22.36 atmosphere 1015.0 30 < th dose dependent rect. 8 6
92 22.38 radiation 1.0 270 < th dose dependent sin 2 NA
124 22.48 wind 9.0 90 < th dose independent rect. 3 5
125 22.48 temperature 10.0 90 > th dose independent rect. 3 5
127 22.48 temperature 30.0 90 < th dose independent rect. 3 5
128 22.48 humidity 50.0 90 > th dose independent rect. 3 5
130 22.48 atmosphere 995.0 90 > th dose independent rect. 3 5
134 22.48 temperature 10.0 90 > th dose independent rect. 8 19
135 22.48 atmosphere 1015.0 270 < th dose dependent rect. 3 2
138 22.49 radiation 40.0 90 < th dose independent rect. 3 5
143 22.50 precipitation 0.1 270 < th dose independent rect. 5 22
146 22.50 precipitation 0.1 270 < th dose dependent rect. 5 22
148 22.52 temperature 15.0 30 > th dose independent rect. 14 18
160 22.54 wind 1.0 30 > th dose independent rect. 8 6
172 22.56 radiation 20.0 270 < th dose dependent rect. 1 8
175 22.57 wind 9.0 270 < th dose independent rect. 3 2
176 22.57 temperature 10.0 270 > th dose independent rect. 3 2
178 22.57 temperature 30.0 270 < th dose independent rect. 3 2
179 22.57 humidity 50.0 270 > th dose independent rect. 3 2
182 22.57 atmosphere 995.0 270 > th dose independent rect. 3 2
183 22.57 atmosphere 1010.0 270 < th dose independent rect. 3 2
185 22.57 radiation 20.0 270 < th dose independent rect. 3 2
190 22.57 temperature 10.0 270 > th dose independent rect. 5 22
191 22.57 radiation 40.0 270 < th dose dependent rect. 3 2
195 22.58 radiation 1.0 270 < th dose independent rect. 3 2
201 22.58 precipitation 0.1 90 < th dose independent rect. 8 19
209 22.58 precipitation 0.1 90 < th dose dependent rect. 8 19
210 22.59 precipitation 0.1 90 < th dose independent rect. 3 5
211 22.59 temperature 10.0 43200 > th dose independent rect. 9 6
214 22.59 humidity 50.0 270 > th dose dependent rect. 3 2
216 22.59 precipitation 0.1 90 < th dose dependent rect. 3 5
222 22.60 humidity 50.0 90 > th dose dependent rect. 3 5
243 22.63 atmosphere 1015.0 90 < th dose dependent rect. 3 5
267 22.68 precipitation 0.1 270 < th dose independent rect. 6 20
268 22.68 temperature 10.0 90 > th dose dependent rect. 3 5
274 22.68 precipitation 0.1 270 < th dose dependent rect. 6 20
283 22.70 humidity 90.0 270 < th dose independent rect. 6 6
295 22.71 wind 9.0 90 < th dose dependent rect. 3 5
301 22.72 temperature 10.0 43200 > th dose independent rect. 9 9
305 22.72 radiation 1.0 270 > th dose dependent sin 8 NA
315 22.73 humidity 90.0 270 < th dose independent rect. 7 4
316 22.73 wind 9.0 30 < th dose independent rect. 8 6
327 22.74 temperature 10.0 30 > th dose independent rect. 8 6
329 22.74 temperature 10.0 1440 > th dose independent rect. 9 6
332 22.74 atmosphere 995.0 30 > th dose independent rect. 8 6
333 22.74 atmosphere 1015.0 30 < th dose independent rect. 8 6
334 22.74 radiation 1.0 10 > th dose independent rect. 8 6
336 22.74 precipitation 0.1 30 < th dose independent rect. 8 6
337 22.74 humidity 50.0 270 > th dose independent rect. 2 17
341 22.74 temperature 10.0 1440 > th dose independent rect. 15 18
346 22.74 wind 9.0 270 < th dose dependent rect. 3 2
349 22.74 precipitation 0.1 30 < th dose dependent rect. 8 6
352 22.74 temperature 10.0 10 > th dose dependent rect. 8 10
362 22.75 radiation 1.0 270 > th dose independent rect. 17 22
382 22.76 radiation 1.0 270 > th dose independent rect. 6 8
385 22.76 atmosphere 995.0 90 > th dose independent rect. 8 19
403 22.77 humidity 90.0 90 < th dose independent rect. 8 6
407 22.77 temperature 10.0 270 > th dose independent rect. 6 20
409 22.77 temperature 10.0 270 > th dose dependent rect. 3 2
423 22.78 wind 7.0 90 < th dose independent rect. 8 9
424 22.78 radiation 40.0 10 < th dose independent rect. 14 18
429 22.78 humidity 50.0 270 > th dose dependent rect. 1 6
435 22.79 wind 9.0 1440 < th dose independent rect. 4 5
437 22.79 temperature 10.0 1440 > th dose independent rect. 4 5
440 22.79 humidity 50.0 1440 > th dose independent rect. 4 5
442 22.79 atmosphere 995.0 1440 > th dose independent rect. 4 5
443 22.79 atmosphere 1015.0 1440 < th dose independent rect. 4 5
444 22.79 wind 9.0 270 < th dose independent rect. 1 6
445 22.79 temperature 10.0 270 > th dose independent rect. 1 6
447 22.79 temperature 30.0 270 < th dose independent rect. 1 6
448 22.79 humidity 50.0 270 > th dose independent rect. 1 6
450 22.79 atmosphere 995.0 270 > th dose independent rect. 1 6
451 22.79 atmosphere 1015.0 270 < th dose independent rect. 1 6
452 22.79 radiation 30.0 270 < th dose independent rect. 1 6
458 22.79 temperature 10.0 1440 > th dose independent rect. 9 19
496 22.80 radiation 1.0 270 > th dose dependent rect. 6 5
499 22.81 precipitation 0.1 270 < th dose independent rect. 3 2
501 22.81 temperature 25.0 30 > th dose independent rect. 8 6
506 22.81 precipitation 0.1 270 < th dose dependent rect. 3 2
533 22.82 radiation 1.0 270 > th dose dependent rect. 17 18
567 22.84 temperature 15.0 270 > th dose independent rect. 14 16
577 22.85 humidity 90.0 270 < th dose independent rect. 8 2
581 22.85 wind 9.0 30 < th dose independent rect. 14 18
582 22.85 atmosphere 1015.0 30 < th dose independent rect. 14 18
587 22.85 atmosphere 1015.0 10 < th dose dependent rect. 4 4
613 22.86 humidity 60.0 10 > th dose independent rect. 12 20
620 22.87 wind 5.0 270 < th dose independent rect. 6 9
648 22.88 radiation 1.0 270 > th dose dependent rect. 16 20
650 22.89 temperature 25.0 270 > th dose independent rect. 8 2
651 22.89 temperature 25.0 270 > th dose independent rect. 7 4
693 22.90 humidity 50.0 30 > th dose dependent rect. 14 18
698 22.91 precipitation 0.1 270 < th dose independent rect. 1 6
705 22.91 atmosphere 995.0 30 > th dose independent rect. 14 18
706 22.91 atmosphere 1015.0 270 < th dose dependent rect. 9 1
710 22.91 precipitation 0.1 270 < th dose dependent rect. 1 6
722 22.92 temperature 25.0 270 > th dose independent rect. 6 6
776 22.94 wind 9.0 270 < th dose dependent rect. 6 9
781 22.95 temperature 30.0 90 < th dose independent rect. 3 13
784 22.95 radiation 1.0 270 > th dose dependent rect. 8 2
837 22.98 radiation 40.0 270 < th dose independent rect. 10 21
847 22.98 wind 9.0 90 < th dose dependent rect. 8 9
862 22.99 radiation 30.0 270 > th dose dependent rect. 9 1
863 22.99 atmosphere 1015.0 270 < th dose dependent rect. 8 3
890 23.01 precipitation 0.1 270 < th dose independent rect. 17 9
893 23.01 radiation 40.0 270 < th dose independent rect. 14 16
897 23.01 radiation 1.0 270 < th dose independent rect. 1 20
900 23.01 precipitation 0.1 270 < th dose dependent rect. 17 9
927 23.02 radiation 40.0 90 < th dose dependent rect. 14 18
938 23.03 temperature 15.0 90 > th dose independent rect. 17 15
945 23.03 radiation 10.0 43200 < th dose dependent rect. 21 7
968 23.04 temperature 15.0 270 > th dose independent rect. 2 17
980 23.04 radiation 40.0 270 < th dose dependent rect. 15 15
989 23.05 precipitation 0.1 270 < th dose independent rect. 6 8
993 23.05 radiation 40.0 270 < th dose dependent sin 6 NA
998 23.05 precipitation 0.1 270 < th dose dependent rect. 6 8