Os08g0110800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0110800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.65 | 0.233 | 12.5 | 0.64 | 0.37 | -0.717 | -0.694 | -0.949 | 0.24 | 14.7 | 28.4 | 117 | -- | -- |
| 25.88 | 0.237 | 12.5 | 0.507 | 0.381 | -0.748 | -0.54 | -- | 0.242 | 14.6 | 51.19 | 118 | -- | -- |
| 25.85 | 0.237 | 12.6 | 0.562 | 0.399 | -0.645 | -- | -0.436 | 0.224 | 14.9 | 28.3 | 120 | -- | -- |
| 26.01 | 0.238 | 12.6 | 0.471 | 0.381 | -0.671 | -- | -- | 0.207 | 14.9 | 29.89 | 119 | -- | -- |
| 32.07 | 0.264 | 12.6 | 0.428 | -- | -1.13 | -- | -0.172 | 0.194 | -- | 47.69 | 69 | -- | -- |
| 31.82 | 0.264 | 12.5 | 0.645 | 0.598 | -- | -0.304 | -- | 0.343 | 15 | -- | -- | -- | -- |
| 32.12 | 0.265 | 12.5 | 0.638 | 0.597 | -- | -- | -- | 0.342 | 15 | -- | -- | -- | -- |
| 31.55 | 0.262 | 12.6 | 0.372 | -- | -1.05 | -- | -- | 0.139 | -- | 30.31 | 111 | -- | -- |
| 31.21 | 0.26 | 12.6 | -- | 0.341 | -0.852 | -- | -- | 0.121 | 15 | 28.5 | 118 | -- | -- |
| 52.56 | 0.339 | 12.5 | 0.612 | -- | -- | -- | -- | 0.326 | -- | -- | -- | -- | -- |
| 42.85 | 0.306 | 12.5 | -- | 0.585 | -- | -- | -- | 0.27 | 15 | -- | -- | -- | -- |
| 34.91 | 0.275 | 12.6 | -- | -- | -1.16 | -- | -- | 0.0764 | -- | 30.16 | 109 | -- | -- |
| 62.45 | 0.369 | 12.5 | -- | -- | -- | -- | -- | 0.258 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.89 | temperature | 15 | 90 | > th | dose dependent | rect. | 7 | 21 |
| 2 | 23.89 | temperature | 15 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 5 | 24.10 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 22 |
| 7 | 24.19 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 22 |
| 27 | 24.48 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 22 |
| 46 | 24.63 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 55 | 24.69 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 19 |
| 89 | 24.83 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 90 | 24.84 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 104 | 24.95 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 116 | 24.99 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 118 | 24.99 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 129 | 25.04 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 133 | 25.04 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 205 | 25.30 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 245 | 25.39 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 254 | 25.40 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 20 |
| 260 | 25.41 | temperature | 20 | 270 | > th | dose dependent | rect. | 19 | 15 |
| 267 | 25.42 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 281 | 25.46 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 282 | 25.46 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 305 | 25.49 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 5 |
| 314 | 25.50 | temperature | 30 | 270 | < th | dose dependent | sin | 8 | NA |
| 315 | 25.50 | temperature | 30 | 90 | < th | dose dependent | sin | 6 | NA |
| 382 | 25.60 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 4 |
| 398 | 25.62 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 411 | 25.63 | temperature | 25 | 270 | < th | dose independent | rect. | 9 | 23 |
| 427 | 25.64 | temperature | 25 | 270 | < th | dose independent | rect. | 23 | 22 |
| 443 | 25.65 | temperature | 10 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 466 | 25.66 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 19 |
| 584 | 25.73 | temperature | 20 | 4320 | > th | dose independent | sin | 17 | NA |
| 585 | 25.73 | temperature | 20 | 4320 | < th | dose independent | sin | 17 | NA |
| 599 | 25.73 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 642 | 25.75 | temperature | 20 | 90 | > th | dose dependent | rect. | 20 | 23 |
| 671 | 25.77 | temperature | 25 | 1440 | < th | dose dependent | sin | 13 | NA |
| 752 | 25.79 | temperature | 25 | 1440 | < th | dose dependent | rect. | 9 | 20 |
| 800 | 25.81 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 831 | 25.81 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 856 | 25.82 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 924 | 25.85 | temperature | 20 | 270 | > th | dose dependent | sin | 10 | NA |