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Os08g0110000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
Description : Esterase/lipase/thioesterase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
46.34 | 0.32 | 11.8 | -0.115 | 1.27 | -0.414 | 0.293 | 0.309 | -0.277 | 5.57 | 79 | 7 | -- | -- |
46.68 | 0.318 | 11.8 | -0.111 | 1.27 | -0.413 | 0.426 | -- | -0.281 | 5.54 | 79 | 6 | -- | -- |
46.53 | 0.318 | 11.8 | -0.119 | 1.27 | -0.405 | -- | 0.377 | -0.279 | 5.6 | 79 | 6 | -- | -- |
47.11 | 0.32 | 11.8 | -0.101 | 1.27 | -0.39 | -- | -- | -0.273 | 5.59 | 79 | 6 | -- | -- |
83.43 | 0.425 | 11.8 | -0.101 | -- | 0.901 | -- | -0.0588 | -0.149 | -- | 57.42 | 410 | -- | -- |
51.27 | 0.336 | 11.8 | -0.132 | 1.07 | -- | 0.219 | -- | -0.213 | 6.29 | -- | -- | -- | -- |
51.39 | 0.336 | 11.8 | -0.13 | 1.07 | -- | -- | -- | -0.214 | 6.3 | -- | -- | -- | -- |
83.21 | 0.425 | 11.8 | -0.118 | -- | 0.93 | -- | -- | -0.164 | -- | 59.69 | 421 | -- | -- |
47.38 | 0.321 | 11.8 | -- | 1.27 | -0.392 | -- | -- | -0.266 | 5.6 | 79 | 6 | -- | -- |
111.18 | 0.493 | 11.8 | -0.101 | -- | -- | -- | -- | -0.191 | -- | -- | -- | -- | -- |
51.83 | 0.337 | 11.8 | -- | 1.07 | -- | -- | -- | -0.199 | 6.31 | -- | -- | -- | -- |
83.53 | 0.426 | 11.8 | -- | -- | 0.91 | -- | -- | -0.14 | -- | 61.06 | 423 | -- | -- |
111.45 | 0.493 | 11.8 | -- | -- | -- | -- | -- | -0.18 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance![]() |
Histogram![]() ![]() |
Local optima within top1000 grid-points
rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
---|---|---|---|---|---|---|---|---|---|
1 | 39.71 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 23 | 18 |
3 | 39.99 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 21 | 10 |
4 | 40.05 | radiation | 10.0 | 270 | < th | dose independent | rect. | 21 | 10 |
7 | 40.51 | radiation | 10.0 | 90 | < th | dose independent | rect. | 23 | 18 |
9 | 40.56 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 23 | 17 |
14 | 40.87 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 23 | 11 |
16 | 40.98 | radiation | 10.0 | 90 | < th | dose independent | rect. | 23 | 11 |
17 | 41.00 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 16 | 6 |
18 | 41.00 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 16 | 6 |
20 | 41.04 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 16 | 19 |
21 | 41.04 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 16 | 19 |
22 | 41.10 | wind | 9.0 | 270 | < th | dose independent | rect. | 22 | 18 |
26 | 41.18 | wind | 1.0 | 270 | > th | dose independent | rect. | 16 | 6 |
32 | 41.25 | humidity | 90.0 | 270 | < th | dose independent | rect. | 16 | 6 |
36 | 41.30 | radiation | 10.0 | 10 | < th | dose independent | rect. | 23 | 17 |
42 | 41.38 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 22 | 18 |
47 | 41.49 | wind | 7.0 | 270 | < th | dose independent | rect. | 11 | 5 |
48 | 41.49 | temperature | 10.0 | 270 | > th | dose independent | rect. | 16 | 6 |
49 | 41.49 | radiation | 30.0 | 270 | < th | dose independent | rect. | 16 | 6 |
51 | 41.49 | temperature | 10.0 | 270 | > th | dose independent | rect. | 22 | 18 |
52 | 41.53 | wind | 9.0 | 270 | < th | dose independent | rect. | 16 | 6 |
57 | 41.58 | humidity | 90.0 | 270 | < th | dose independent | rect. | 17 | 4 |
59 | 41.60 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 14 |
60 | 41.60 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 14 |
69 | 41.72 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 11 | 5 |
71 | 41.73 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 4 |
72 | 41.73 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 4 |
75 | 41.76 | humidity | 70.0 | 270 | > th | dose independent | rect. | 21 | 10 |
77 | 41.80 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 22 | 18 |
89 | 41.86 | temperature | 15.0 | 270 | > th | dose independent | rect. | 11 | 5 |
91 | 41.87 | wind | 9.0 | 270 | < th | dose independent | rect. | 21 | 20 |
95 | 41.91 | wind | 1.0 | 270 | > th | dose independent | rect. | 17 | 4 |
97 | 41.91 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 11 | 5 |
98 | 41.91 | temperature | 10.0 | 270 | > th | dose independent | rect. | 16 | 19 |
101 | 41.94 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 9 |
102 | 41.94 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 9 |
111 | 42.00 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 5 |
112 | 42.00 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 10 |
113 | 42.00 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 10 |
114 | 42.00 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 10 |
116 | 42.00 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 10 |
118 | 42.00 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 14 |
119 | 42.00 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 5 |
121 | 42.01 | wind | 9.0 | 270 | < th | dose independent | rect. | 21 | 10 |
122 | 42.01 | wind | 9.0 | 270 | < th | dose independent | rect. | 16 | 19 |
158 | 42.15 | wind | 9.0 | 270 | < th | dose dependent | rect. | 11 | 5 |
161 | 42.17 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 16 | 6 |
167 | 42.21 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 4 |
172 | 42.23 | radiation | 20.0 | 270 | < th | dose independent | rect. | 17 | 4 |
176 | 42.23 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 22 | 18 |
177 | 42.23 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 20 |
179 | 42.23 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 22 | 18 |
180 | 42.24 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 4 |
183 | 42.25 | wind | 1.0 | 270 | > th | dose independent | rect. | 11 | 5 |
184 | 42.25 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 16 | 6 |
189 | 42.27 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 4 |
198 | 42.32 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 16 | 6 |
206 | 42.34 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 20 |
209 | 42.35 | radiation | 20.0 | 10 | < th | dose dependent | sin | 6 | NA |
212 | 42.37 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 16 | 6 |
215 | 42.38 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 17 | 4 |
217 | 42.40 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 4 |
222 | 42.42 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 14 |
225 | 42.43 | wind | 9.0 | 270 | < th | dose independent | rect. | 11 | 15 |
235 | 42.44 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 21 | 9 |
236 | 42.45 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 17 |
254 | 42.52 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 17 | 4 |
264 | 42.58 | humidity | 50.0 | 270 | > th | dose independent | rect. | 16 | 6 |
266 | 42.58 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 16 | 19 |
268 | 42.58 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 23 | 19 |
271 | 42.59 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 4 |
292 | 42.65 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 9 |
293 | 42.65 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 9 |
294 | 42.65 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 9 |
296 | 42.65 | temperature | 10.0 | 270 | > th | dose independent | rect. | 11 | 15 |
306 | 42.68 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 17 |
323 | 42.72 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 14 |
326 | 42.73 | humidity | 80.0 | 10 | > th | dose independent | rect. | 23 | 19 |
334 | 42.76 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 9 |
336 | 42.77 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 9 |
337 | 42.77 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 9 |
341 | 42.77 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 9 |
347 | 42.78 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 23 | 17 |
384 | 42.86 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 23 | 8 |
391 | 42.88 | wind | 1.0 | 270 | > th | dose dependent | rect. | 17 | 4 |
414 | 42.94 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 15 |
426 | 42.98 | radiation | 1.0 | 270 | > th | dose independent | rect. | 11 | 5 |
448 | 43.03 | humidity | 90.0 | 270 | < th | dose independent | rect. | 11 | 5 |
468 | 43.07 | radiation | 10.0 | 10 | < th | dose independent | rect. | 23 | 12 |
470 | 43.07 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 23 | 10 |
519 | 43.14 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 20 |
524 | 43.14 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 20 |
554 | 43.22 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 23 | 18 |
565 | 43.24 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 19 | 6 |
582 | 43.28 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 11 | 16 |
585 | 43.28 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 23 | 11 |
609 | 43.34 | radiation | 40.0 | 270 | < th | dose independent | rect. | 17 | 17 |
634 | 43.37 | wind | 1.0 | 270 | > th | dose independent | rect. | 22 | 18 |
642 | 43.38 | wind | 1.0 | 270 | > th | dose dependent | rect. | 16 | 6 |
655 | 43.40 | humidity | 70.0 | 90 | > th | dose independent | rect. | 23 | 8 |
661 | 43.40 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 10 | 6 |
690 | 43.44 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 22 | 18 |
699 | 43.46 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 21 | 9 |
733 | 43.49 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 23 | 10 |
780 | 43.55 | humidity | 80.0 | 90 | > th | dose independent | rect. | 23 | 10 |
782 | 43.56 | humidity | 50.0 | 270 | > th | dose independent | rect. | 22 | 18 |
785 | 43.56 | radiation | 1.0 | 270 | > th | dose independent | rect. | 16 | 19 |
827 | 43.63 | wind | 9.0 | 90 | < th | dose independent | rect. | 23 | 8 |
828 | 43.63 | temperature | 10.0 | 90 | > th | dose independent | rect. | 23 | 8 |
829 | 43.63 | temperature | 30.0 | 90 | < th | dose independent | rect. | 23 | 8 |
830 | 43.63 | humidity | 50.0 | 90 | > th | dose independent | rect. | 23 | 8 |
895 | 43.71 | humidity | 50.0 | 270 | > th | dose independent | rect. | 11 | 5 |
923 | 43.74 | radiation | 10.0 | 10 | < th | dose independent | sin | 6 | NA |
925 | 43.74 | radiation | 40.0 | 30 | < th | dose independent | rect. | 12 | 6 |
929 | 43.74 | radiation | 40.0 | 30 | < th | dose independent | rect. | 12 | 16 |
950 | 43.77 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 16 |
956 | 43.77 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 16 |