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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0108300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Pistil-specific extensin-like protein family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.82 (0.0161) R2 : 0.00639
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0579 (0.0338) R2dN8 : 0.00826 R2N8 : 0.00639
σ : 0.302
deviance : 41.99
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
40.08 0.297 3.45 1.24 0.0432 73.9 -0.128 155 0.0492 7.81 14.98 753 -- --
41.5 0.302 2.82 -0.112 0.0467 0.0218 -0.106 -- 0.0444 6.98 14.98 753 -- --
40.05 0.295 3.39 1.09 0.0476 75.4 -- 159 0.0479 6.56 14.9 753 -- --
41.35 0.299 2.82 -0.0908 0.0468 0.243 -- -- 0.0514 6.58 15.2 773 -- --
40.16 0.295 3.39 1.09 -- 75.6 -- 159 0.0508 -- 14.9 753 -- --
41.5 0.302 2.82 -0.113 0.0468 -- -0.104 -- 0.0441 6.92 -- -- -- --
41.53 0.302 2.82 -0.115 0.0478 -- -- -- 0.0442 6.2 -- -- -- --
41.46 0.3 2.82 -0.0916 -- 0.244 -- -- 0.0517 -- 15.2 773 -- --
41.56 0.3 2.82 -- 0.0452 0.317 -- -- 0.0546 6.3 15.2 773 -- --
41.64 0.302 2.82 -0.114 -- -- -- -- 0.0453 -- -- -- -- --
41.88 0.303 2.82 -- 0.0462 -- -- -- 0.0571 6.33 -- -- -- --
41.67 0.301 2.82 -- -- 0.311 -- -- 0.0621 -- 15.2 773 -- --
41.99 0.302 2.82 -- -- -- -- -- 0.0579 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 36.15 wind 9.0 10 > th dose independent rect. 18 1
4 36.15 wind 9.0 10 > th dose dependent rect. 18 1
7 36.66 wind 9.0 90 > th dose dependent rect. 17 17
25 36.91 wind 9.0 30 > th dose independent rect. 17 9
140 37.43 wind 9.0 90 > th dose independent sin 12 NA
141 37.44 wind 9.0 10 > th dose independent sin 12 NA
143 37.47 wind 9.0 90 > th dose dependent sin 13 NA
193 37.83 wind 9.0 90 > th dose independent rect. 14 5
195 37.83 wind 9.0 90 > th dose independent rect. 14 9
258 37.88 wind 7.0 10 > th dose dependent rect. 17 12
276 37.96 wind 9.0 90 < th dose independent sin 12 NA
377 38.13 wind 9.0 10 < th dose independent sin 12 NA
380 38.19 humidity 70.0 90 < th dose independent rect. 16 1
386 38.30 temperature 20.0 90 < th dose dependent rect. 9 3
390 38.37 temperature 20.0 10 < th dose dependent rect. 10 2
393 38.39 temperature 20.0 10 < th dose independent rect. 10 2
431 38.50 temperature 20.0 90 < th dose independent rect. 10 1
449 38.56 humidity 90.0 90 > th dose independent rect. 10 1
451 38.56 precipitation 0.1 90 > th dose independent rect. 10 1
473 38.56 humidity 90.0 90 > th dose dependent rect. 10 1
475 38.56 precipitation 0.1 90 > th dose dependent rect. 10 1
634 38.96 humidity 90.0 10 < th dose dependent rect. 17 1
646 38.98 radiation 10.0 10 > th dose independent rect. 6 1
673 38.98 radiation 10.0 10 > th dose dependent rect. 6 1
704 39.02 temperature 15.0 720 < th dose independent rect. 1 1
707 39.02 wind 3.0 30 < th dose dependent rect. 6 1
708 39.02 temperature 15.0 720 < th dose dependent rect. 1 1
711 39.03 atmosphere 1005.0 30 > th dose dependent rect. 6 1
714 39.04 radiation 1.0 10 > th dose dependent rect. 17 2
766 39.12 wind 7.0 10 > th dose dependent sin 11 NA
791 39.19 humidity 80.0 30 > th dose dependent rect. 6 1
802 39.22 wind 9.0 10 < th dose independent rect. 7 23
805 39.23 humidity 70.0 90 < th dose dependent rect. 16 1
839 39.25 temperature 30.0 30 < th dose dependent rect. 6 1
849 39.29 temperature 25.0 90 < th dose independent rect. 17 1
858 39.31 wind 3.0 30 < th dose independent rect. 6 1
877 39.32 radiation 1.0 90 < th dose dependent rect. 17 1
899 39.37 wind 9.0 1440 < th dose independent rect. 7 1
900 39.37 temperature 25.0 10 > th dose independent rect. 6 1
901 39.37 temperature 10.0 1440 > th dose independent rect. 7 1
905 39.37 temperature 30.0 1440 < th dose independent rect. 7 1
909 39.37 humidity 50.0 1440 > th dose independent rect. 7 1
914 39.37 atmosphere 995.0 1440 > th dose independent rect. 7 1
915 39.37 atmosphere 1015.0 1440 < th dose independent rect. 7 1
918 39.37 temperature 10.0 1440 > th dose independent rect. 8 23
926 39.39 humidity 80.0 30 > th dose independent rect. 6 1
927 39.39 atmosphere 1005.0 30 > th dose independent rect. 6 1
934 39.40 humidity 90.0 30 < th dose independent rect. 6 1
937 39.41 wind 1.0 30 > th dose independent rect. 6 1
941 39.41 temperature 10.0 30 > th dose independent rect. 6 1
943 39.41 temperature 30.0 30 < th dose independent rect. 6 1
944 39.41 humidity 50.0 30 > th dose independent rect. 6 1
947 39.41 atmosphere 995.0 30 > th dose independent rect. 6 1
949 39.41 atmosphere 1015.0 30 < th dose independent rect. 6 1
950 39.41 radiation 20.0 30 < th dose independent rect. 6 1
953 39.41 precipitation 0.1 30 < th dose independent rect. 6 1
957 39.41 temperature 10.0 30 > th dose independent rect. 7 23
959 39.41 precipitation 0.1 30 < th dose dependent rect. 6 1
994 39.45 precipitation 0.1 30 < th dose independent rect. 7 23
997 39.45 precipitation 0.1 30 < th dose dependent rect. 7 23