Os08g0106100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os08g0106100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 173.37 | 0.619 | 6.32 | -1.22 | 1.99 | 2.77 | -0.605 | -0.198 | -0.667 | 3.23 | 21.38 | 1392 | -- | -- |
| 172.53 | 0.612 | 6.32 | -1.14 | 1.98 | 2.72 | -0.693 | -- | -0.674 | 3.22 | 21.56 | 1398 | -- | -- |
| 174.24 | 0.615 | 6.32 | -1.21 | 1.99 | 2.73 | -- | -0.288 | -0.673 | 3.23 | 21.4 | 1398 | -- | -- |
| 173.91 | 0.614 | 6.32 | -1.1 | 1.99 | 2.67 | -- | -- | -0.676 | 3.23 | 21.6 | 1398 | -- | -- |
| 369.43 | 0.895 | 6.36 | -1.24 | -- | 2.67 | -- | -1.01 | -0.762 | -- | 21.98 | 1139 | -- | -- |
| 390.65 | 0.927 | 6.14 | -0.0313 | 2.11 | -- | -0.949 | -- | 0.113 | 3.17 | -- | -- | -- | -- |
| 393.59 | 0.929 | 6.14 | -0.0118 | 2.1 | -- | -- | -- | 0.118 | 3.17 | -- | -- | -- | -- |
| 372.03 | 0.898 | 6.33 | -0.929 | -- | 2.7 | -- | -- | -0.69 | -- | 21.94 | 1139 | -- | -- |
| 197.7 | 0.655 | 6.31 | -- | 2.04 | 2.46 | -- | -- | -0.618 | 3.18 | 21.9 | 1406 | -- | -- |
| 645.04 | 1.19 | 6.14 | 0.0776 | -- | -- | -- | -- | 0.173 | -- | -- | -- | -- | -- |
| 393.59 | 0.928 | 6.14 | -- | 2.1 | -- | -- | -- | 0.12 | 3.17 | -- | -- | -- | -- |
| 391 | 0.921 | 6.31 | -- | -- | 2.42 | -- | -- | -0.585 | -- | 22.2 | 1134 | -- | -- |
| 645.2 | 1.19 | 6.14 | -- | -- | -- | -- | -- | 0.165 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 172.88 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 14 |
| 6 | 173.04 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 10 |
| 15 | 173.56 | temperature | 25 | 1440 | < th | dose dependent | sin | 11 | NA |
| 35 | 174.36 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 3 |
| 49 | 174.99 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 3 |
| 78 | 175.64 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 167 | 177.52 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 9 |
| 200 | 178.06 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 221 | 178.33 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 358 | 180.64 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 388 | 181.18 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 447 | 182.19 | temperature | 15 | 1440 | > th | dose dependent | sin | 10 | NA |
| 783 | 189.35 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 13 |
| 796 | 189.50 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 13 |
| 829 | 190.04 | temperature | 20 | 1440 | > th | dose independent | sin | 8 | NA |
| 830 | 190.04 | temperature | 20 | 1440 | < th | dose independent | sin | 8 | NA |
| 863 | 190.53 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 13 |