Os08g0105800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os08g0105800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 145.66 | 0.567 | 7 | -0.939 | 0.23 | -0.888 | 1.49 | -3.84 | -0.46 | 5.96 | 0.2702 | 4085 | -- | -- |
| 152.81 | 0.576 | 6.95 | -0.978 | 0.221 | -0.994 | 1.34 | -- | -0.45 | 5.66 | 0.5788 | 5430 | -- | -- |
| 150.83 | 0.572 | 7 | -0.942 | 0.247 | -0.854 | -- | -3.75 | -0.456 | 4.89 | 0.306 | 4085 | -- | -- |
| 148.22 | 0.567 | 6.93 | -0.599 | 0.168 | -1.11 | -- | -- | -0.446 | 6.01 | 0.5001 | 23581 | -- | -- |
| 154.02 | 0.578 | 7 | -0.936 | -- | -0.849 | -- | -3.66 | -0.457 | -- | 0.3659 | 4085 | -- | -- |
| 170.82 | 0.613 | 6.94 | -1.28 | 0.206 | -- | 1.26 | -- | -0.387 | 6.01 | -- | -- | -- | -- |
| 174.4 | 0.618 | 6.94 | -1.27 | 0.225 | -- | -- | -- | -0.392 | 4.73 | -- | -- | -- | -- |
| 148.45 | 0.567 | 6.96 | -0.528 | -- | -1.14 | -- | -- | -0.48 | -- | 1.5 | 23937 | -- | -- |
| 154.25 | 0.578 | 6.94 | -- | 0.228 | -1.22 | -- | -- | -0.363 | 5.5 | 1.177 | 23897 | -- | -- |
| 177.09 | 0.622 | 6.94 | -1.26 | -- | -- | -- | -- | -0.386 | -- | -- | -- | -- | -- |
| 216.86 | 0.689 | 6.91 | -- | 0.202 | -- | -- | -- | -0.251 | 4.91 | -- | -- | -- | -- |
| 150.43 | 0.571 | 6.97 | -- | -- | -1.06 | -- | -- | -0.516 | -- | 1.614 | 47520 | -- | -- |
| 219.02 | 0.691 | 6.91 | -- | -- | -- | -- | -- | -0.247 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 134.26 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 2 | 135.46 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 3 | 135.73 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 5 | 136.24 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 8 | 136.79 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 6 |
| 23 | 137.90 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 24 | 137.91 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 34 | 138.32 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 42 | 138.81 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 3 |
| 46 | 138.96 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 15 | 9 |
| 47 | 138.98 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 15 | 10 |
| 49 | 138.98 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 15 | 10 |
| 78 | 139.38 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 11 |
| 89 | 139.62 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 7 |
| 94 | 139.66 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 8 |
| 128 | 139.96 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 11 |
| 150 | 140.04 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 8 |
| 183 | 140.26 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 187 | 140.27 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 206 | 140.51 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 4 | 16 |
| 234 | 140.66 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 259 | 140.76 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 16 | 15 |
| 260 | 140.77 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 17 | NA |
| 261 | 140.77 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 17 | NA |
| 264 | 140.77 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 17 | NA |
| 345 | 141.34 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 376 | 141.68 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 409 | 141.81 | wind | 5.0 | 43200 | > th | dose independent | rect. | 17 | 8 |
| 433 | 142.04 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 440 | 142.25 | wind | 5.0 | 43200 | < th | dose independent | rect. | 17 | 8 |
| 443 | 142.30 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 449 | 142.37 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 467 | 142.50 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 17 | 3 |
| 489 | 142.63 | wind | 5.0 | 43200 | < th | dose independent | rect. | 16 | 16 |
| 491 | 142.63 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 20 | 2 |
| 505 | 142.72 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 13 | 14 |
| 509 | 142.76 | wind | 5.0 | 43200 | > th | dose independent | rect. | 16 | 16 |
| 510 | 142.77 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 11 | 16 |
| 519 | 142.83 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 13 | 12 |
| 521 | 142.85 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 527 | 142.90 | wind | 5.0 | 43200 | < th | dose independent | rect. | 15 | 19 |
| 547 | 142.97 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 6 | 20 |
| 556 | 142.99 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 6 | 17 |
| 561 | 143.04 | wind | 5.0 | 43200 | > th | dose independent | rect. | 15 | 19 |
| 566 | 143.05 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 594 | 143.15 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 20 | 22 |
| 635 | 143.31 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 15 | 10 |
| 641 | 143.33 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 644 | 143.33 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 658 | 143.39 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 661 | 143.40 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 15 | 12 |
| 677 | 143.46 | wind | 5.0 | 43200 | > th | dose dependent | sin | 13 | NA |
| 691 | 143.49 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 16 | 15 |
| 737 | 143.64 | wind | 5.0 | 43200 | > th | dose independent | sin | 13 | NA |
| 738 | 143.64 | wind | 5.0 | 43200 | < th | dose independent | sin | 13 | NA |
| 772 | 143.79 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 15 | 17 |
| 778 | 143.82 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 18 | 1 |
| 782 | 143.84 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 20 | 22 |
| 789 | 143.87 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 20 | 22 |
| 790 | 143.87 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 20 | 22 |
| 792 | 143.89 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 12 | 4 |
| 805 | 143.94 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 16 | NA |
| 813 | 143.96 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 17 | 4 |
| 820 | 143.97 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 821 | 143.98 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 921 | 144.23 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 935 | 144.26 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 947 | 144.28 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 17 | 16 |
| 959 | 144.32 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 16 | 8 |
| 968 | 144.33 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 990 | 144.39 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 991 | 144.40 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 16 | 3 |
| 996 | 144.41 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 2 | 3 |
| 1000 | 144.42 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |