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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0105700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Cytochrome P450 71C1 (EC 1.14.-.-).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.36 (0.0362) R2 : 0.124
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.2 (0.157) R2dE : 0.127 R2E : 0.124
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0281 (0.0796) R2dN8 : 0.000344 R2N8 : -0.00357
σ : 0.671
deviance : 207.52
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : 29.96
memory length : 489
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
192.88 0.653 3.35 0.531 0.333 1.57 0.573 0.375 0.0721 6.46 23.02 593 -- --
193.03 0.647 3.34 0.582 0.341 1.5 0.652 -- 0.0868 6.48 23.19 609 -- --
193.49 0.648 3.35 0.522 0.34 1.63 -- 0.607 0.0708 5.84 22.98 625 -- --
193.87 0.649 3.34 0.591 0.356 1.48 -- -- 0.0902 5.76 23.33 662 -- --
199.2 0.657 3.36 0.515 -- 1.76 -- 0.788 0.0789 -- 22.9 572 -- --
221.32 0.697 3.39 0.193 0.451 -- 0.655 -- -0.156 7.1 -- -- -- --
222.42 0.698 3.39 0.205 0.454 -- -- -- -0.157 6.91 -- -- -- --
199.88 0.658 3.34 0.616 -- 1.58 -- -- 0.107 -- 23.25 578 -- --
201.93 0.662 3.36 -- 0.376 1.2 -- -- -0.0138 5.99 23.36 639 -- --
233.25 0.714 3.4 0.215 -- -- -- -- -0.149 -- -- -- -- --
223.53 0.699 3.4 -- 0.457 -- -- -- -0.18 6.88 -- -- -- --
207.52 0.671 3.36 -- -- 1.2 -- -- 0.0281 -- 29.96 489 -- --
234.47 0.715 3.41 -- -- -- -- -- -0.173 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 188.67 temperature 15 720 > th dose dependent rect. 3 5
3 189.13 temperature 10 720 > th dose dependent rect. 20 13
9 189.68 temperature 10 720 > th dose dependent rect. 20 19
10 189.81 temperature 10 720 > th dose dependent rect. 21 11
18 190.31 temperature 30 720 < th dose dependent rect. 24 3
26 190.57 temperature 30 720 < th dose dependent rect. 24 11
28 190.60 temperature 30 720 < th dose dependent rect. 24 5
42 190.95 wind 9 43200 > th dose dependent rect. 17 13
43 190.96 temperature 10 720 > th dose dependent sin 8 NA
46 191.01 wind 9 43200 > th dose dependent rect. 16 15
58 191.23 wind 9 43200 > th dose dependent rect. 17 7
66 191.32 wind 9 43200 > th dose dependent rect. 17 10
78 191.62 temperature 20 720 > th dose independent rect. 20 19
115 192.28 wind 9 43200 > th dose independent rect. 17 14
127 192.41 wind 9 43200 > th dose dependent rect. 17 4
134 192.51 temperature 25 720 < th dose dependent rect. 24 20
140 192.65 temperature 30 720 < th dose dependent sin 8 NA
166 192.97 wind 9 43200 > th dose independent rect. 17 10
173 193.05 wind 9 43200 > th dose independent rect. 17 7
175 193.06 wind 9 43200 < th dose independent rect. 17 15
219 193.53 wind 9 43200 < th dose independent rect. 17 10
260 193.96 temperature 10 10 > th dose dependent rect. 23 23
299 194.22 wind 9 43200 > th dose dependent sin 13 NA
308 194.31 temperature 20 720 > th dose independent rect. 3 5
320 194.37 wind 9 43200 > th dose independent sin 12 NA
335 194.47 wind 7 43200 < th dose independent rect. 20 1
347 194.53 temperature 20 720 > th dose independent rect. 3 21
359 194.59 temperature 20 720 > th dose independent rect. 20 14
363 194.63 wind 7 43200 > th dose independent rect. 20 1
384 194.79 wind 9 43200 < th dose independent sin 12 NA
391 194.81 temperature 20 720 > th dose independent sin 7 NA
428 194.97 wind 7 43200 > th dose dependent rect. 20 1
435 195.00 temperature 25 720 < th dose dependent no NA NA
459 195.09 wind 9 43200 > th dose dependent rect. 20 4
465 195.13 wind 9 43200 > th dose independent rect. 20 4
467 195.14 temperature 10 720 > th dose dependent rect. 3 12
470 195.16 temperature 20 720 > th dose independent rect. 3 12
478 195.19 wind 9 43200 > th dose dependent rect. 20 10
487 195.21 temperature 25 720 < th dose dependent rect. 5 23
493 195.23 wind 9 43200 > th dose dependent rect. 20 6
496 195.24 wind 9 43200 < th dose independent rect. 20 5
499 195.26 temperature 15 270 > th dose dependent rect. 3 21
538 195.46 temperature 20 720 > th dose independent rect. 12 20
539 195.46 temperature 25 720 < th dose dependent rect. 8 23
545 195.49 temperature 15 30 > th dose dependent rect. 3 23
581 195.66 temperature 25 720 < th dose dependent rect. 3 23
596 195.74 wind 9 43200 > th dose independent rect. 17 4
626 195.88 wind 9 43200 > th dose independent rect. 20 10
634 195.91 wind 9 43200 < th dose independent rect. 17 4
681 196.05 temperature 25 1440 < th dose dependent rect. 17 1
761 196.38 wind 9 43200 < th dose independent rect. 14 20
813 196.58 temperature 15 30 > th dose dependent rect. 5 21
821 196.61 temperature 30 30 < th dose dependent rect. 7 23
829 196.66 wind 9 43200 > th dose dependent sin 17 NA
835 196.68 temperature 10 720 > th dose dependent rect. 12 21
861 196.78 temperature 20 720 < th dose independent rect. 24 22
872 196.81 temperature 15 90 > th dose dependent rect. 5 16
996 197.20 temperature 20 720 < th dose independent rect. 19 20