Os08g0103600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : BTB domain containing protein.
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Os08g0103600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : BTB domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 47.01 | 0.322 | 10.6 | -0.863 | 1.02 | 1.57 | -0.238 | 5.73 | -0.101 | 0.907 | 0.6305 | 1455 | -- | -- |
| 56.39 | 0.35 | 10.5 | -0.399 | 1.03 | 0.726 | -0.169 | -- | 0.0294 | 23.8 | 13.22 | 3592 | -- | -- |
| 47.02 | 0.319 | 10.6 | -0.867 | 1.07 | 1.55 | -- | 5.67 | -0.107 | 0.892 | 0.5738 | 1440 | -- | -- |
| 56.46 | 0.35 | 10.5 | -0.383 | 1.02 | 0.688 | -- | -- | 0.0371 | 24 | 15.12 | 3584 | -- | -- |
| 69.05 | 0.389 | 10.5 | -0.308 | -- | 0.739 | -- | -0.325 | -0.0291 | -- | 1.29 | 1632 | -- | -- |
| 61.3 | 0.367 | 10.5 | -0.377 | 1.04 | -- | -0.141 | -- | -0.0602 | 0.801 | -- | -- | -- | -- |
| 61.39 | 0.367 | 10.5 | -0.372 | 1.04 | -- | -- | -- | -0.0595 | 0.806 | -- | -- | -- | -- |
| 62.33 | 0.368 | 10.5 | -0.0623 | -- | 0.966 | -- | -- | 0.0219 | -- | 4.466 | 145 | -- | -- |
| 57.71 | 0.354 | 10.5 | -- | 1.01 | 0.669 | -- | -- | 0.083 | 23.9 | 55.21 | 2104 | -- | -- |
| 128.88 | 0.53 | 10.5 | -0.334 | -- | -- | -- | -- | -0.0404 | -- | -- | -- | -- | -- |
| 65.03 | 0.377 | 10.5 | -- | 1.03 | -- | -- | -- | -0.018 | 0.789 | -- | -- | -- | -- |
| 62.13 | 0.367 | 10.5 | -- | -- | 0.856 | -- | -- | 0.0263 | -- | 3.81 | 134 | -- | -- |
| 131.82 | 0.536 | 10.5 | -- | -- | -- | -- | -- | -0.00332 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 43.69 | wind | 3 | 43200 | > th | dose independent | rect. | 3 | 4 |
| 3 | 43.87 | wind | 3 | 43200 | < th | dose independent | rect. | 2 | 3 |
| 5 | 43.88 | wind | 3 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 7 | 43.91 | humidity | 80 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 10 | 43.96 | humidity | 80 | 14400 | > th | dose dependent | rect. | 18 | 3 |
| 25 | 44.27 | wind | 3 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 32 | 44.38 | wind | 3 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 36 | 44.47 | wind | 1 | 43200 | > th | dose dependent | rect. | 3 | 4 |
| 44 | 44.53 | wind | 5 | 43200 | < th | dose dependent | rect. | 2 | 5 |
| 49 | 44.57 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 19 |
| 58 | 44.63 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 21 |
| 75 | 44.70 | wind | 9 | 43200 | < th | dose dependent | rect. | 3 | 4 |
| 97 | 44.85 | wind | 9 | 43200 | < th | dose dependent | rect. | 24 | 7 |
| 98 | 44.85 | humidity | 90 | 14400 | > th | dose dependent | rect. | 1 | 22 |
| 121 | 44.97 | humidity | 80 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 128 | 45.00 | humidity | 90 | 14400 | > th | dose dependent | rect. | 9 | 17 |
| 131 | 45.01 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 8 |
| 154 | 45.08 | humidity | 80 | 43200 | < th | dose dependent | rect. | 2 | 6 |
| 180 | 45.18 | humidity | 80 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 181 | 45.19 | wind | 5 | 43200 | < th | dose dependent | rect. | 1 | 3 |
| 222 | 45.31 | humidity | 90 | 14400 | > th | dose dependent | sin | 16 | NA |
| 224 | 45.31 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 20 |
| 225 | 45.31 | humidity | 90 | 14400 | > th | dose dependent | rect. | 15 | 22 |
| 252 | 45.37 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 253 | 45.37 | temperature | 25 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 264 | 45.38 | humidity | 90 | 14400 | > th | dose dependent | rect. | 12 | 23 |
| 269 | 45.39 | humidity | 90 | 14400 | > th | dose dependent | rect. | 8 | 22 |
| 286 | 45.41 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 300 | 45.45 | humidity | 80 | 14400 | < th | dose independent | rect. | 13 | 7 |
| 301 | 45.45 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 6 |
| 324 | 45.48 | humidity | 80 | 14400 | > th | dose dependent | rect. | 13 | 10 |
| 328 | 45.49 | humidity | 90 | 14400 | < th | dose independent | rect. | 20 | 3 |
| 341 | 45.51 | humidity | 80 | 14400 | > th | dose independent | rect. | 13 | 7 |
| 367 | 45.57 | humidity | 90 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 371 | 45.57 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 17 |
| 384 | 45.60 | temperature | 30 | 14400 | < th | dose dependent | rect. | 12 | 7 |
| 393 | 45.62 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 418 | 45.65 | humidity | 90 | 14400 | > th | dose dependent | sin | 0 | NA |
| 443 | 45.68 | wind | 7 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 455 | 45.70 | temperature | 10 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 470 | 45.72 | temperature | 10 | 14400 | > th | dose dependent | rect. | 13 | 5 |
| 475 | 45.73 | temperature | 20 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 487 | 45.74 | temperature | 10 | 14400 | > th | dose dependent | rect. | 15 | 3 |
| 529 | 45.78 | humidity | 80 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 597 | 45.82 | humidity | 90 | 14400 | > th | dose independent | rect. | 1 | 22 |
| 609 | 45.83 | wind | 7 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 611 | 45.83 | temperature | 30 | 14400 | < th | dose dependent | sin | 21 | NA |
| 615 | 45.83 | wind | 1 | 43200 | < th | dose dependent | rect. | 23 | 7 |
| 632 | 45.84 | humidity | 90 | 14400 | > th | dose independent | rect. | 19 | 5 |
| 754 | 45.91 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 7 |
| 755 | 45.91 | temperature | 20 | 14400 | > th | dose independent | rect. | 18 | 8 |
| 770 | 45.92 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 18 |
| 890 | 45.98 | temperature | 20 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 895 | 45.98 | temperature | 10 | 14400 | > th | dose dependent | sin | 21 | NA |
| 914 | 45.99 | temperature | 25 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 915 | 45.99 | temperature | 25 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 935 | 46.00 | temperature | 20 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 937 | 46.00 | humidity | 90 | 1440 | < th | dose independent | rect. | 6 | 9 |
| 971 | 46.02 | humidity | 80 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 972 | 46.02 | humidity | 80 | 14400 | > th | dose independent | rect. | 16 | 4 |
| 988 | 46.02 | wind | 1 | 43200 | < th | dose dependent | rect. | 18 | 13 |
| 994 | 46.03 | humidity | 90 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 997 | 46.03 | radiation | 1 | 1440 | < th | dose dependent | sin | 2 | NA |