Os08g0103100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os08g0103100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 457.13 | 1 | 4.19 | -0.673 | 1.67 | 0.456 | -2.26 | -8.8 | -0.624 | 20.7 | 0.09724 | 5127 | -- | -- |
| 517.61 | 1.06 | 4.11 | -0.905 | 1.62 | -0.493 | -2.05 | -- | -0.719 | 20.5 | 6.254e-07 | 7044 | -- | -- |
| 473.92 | 1.01 | 4.19 | -0.619 | 1.68 | 0.449 | -- | -8.67 | -0.638 | 20.6 | 0.1655 | 5126 | -- | -- |
| 517.35 | 1.06 | 4.11 | -0.789 | 1.6 | -0.841 | -- | -- | -0.832 | 20.7 | 1 | 7037 | -- | -- |
| 633.47 | 1.17 | 4.14 | -0.59 | -- | 0.39 | -- | -8.6 | -0.638 | -- | 0.2223 | 5245 | -- | -- |
| 521.87 | 1.07 | 4.1 | -1.17 | 1.68 | -- | -2.16 | -- | -0.687 | 20.6 | -- | -- | -- | -- |
| 536.93 | 1.09 | 4.1 | -1.1 | 1.69 | -- | -- | -- | -0.685 | 20.5 | -- | -- | -- | -- |
| 666.94 | 1.2 | 4.08 | -0.708 | -- | -1.18 | -- | -- | -0.825 | -- | 1 | 15684 | -- | -- |
| 517.76 | 1.06 | 4.09 | -- | 1.67 | -1.25 | -- | -- | -0.68 | 20.7 | 0.9534 | 13495 | -- | -- |
| 696.64 | 1.23 | 4.06 | -1.11 | -- | -- | -- | -- | -0.702 | -- | -- | -- | -- | -- |
| 568.82 | 1.12 | 4.07 | -- | 1.69 | -- | -- | -- | -0.563 | 20.4 | -- | -- | -- | -- |
| 676.04 | 1.21 | 4.07 | -- | -- | -1.3 | -- | -- | -0.759 | -- | 1.107 | 17198 | -- | -- |
| 729 | 1.26 | 4.03 | -- | -- | -- | -- | -- | -0.579 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 443.56 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 2 | 16 |
| 2 | 443.56 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 2 | 16 |
| 3 | 443.76 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 2 | 16 |
| 19 | 447.34 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 14 | 3 |
| 20 | 447.34 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 14 | 3 |
| 21 | 447.54 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 9 |
| 22 | 447.54 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 9 |
| 29 | 447.96 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 9 |
| 33 | 448.80 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 2 | 16 |
| 38 | 448.86 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 14 | 3 |
| 40 | 449.07 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 14 | 3 |
| 44 | 449.14 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 3 | NA |
| 45 | 449.14 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 3 | NA |
| 49 | 449.18 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 3 | NA |
| 62 | 449.81 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 23 | 8 |
| 86 | 450.46 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 9 |
| 96 | 450.76 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 3 | NA |
| 121 | 451.36 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 135 | 451.63 | wind | 3.0 | 14400 | > th | dose independent | rect. | 23 | 8 |
| 153 | 451.82 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 155 | 451.83 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 167 | 452.00 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 2 | 9 |
| 180 | 452.15 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 2 | 9 |
| 213 | 452.40 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 223 | 452.55 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 2 | 9 |
| 224 | 452.55 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 2 | 9 |
| 234 | 452.66 | wind | 3.0 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 248 | 452.72 | wind | 3.0 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 256 | 452.78 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 268 | 452.91 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 273 | 452.95 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 6 |
| 275 | 452.96 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 24 | 2 |
| 350 | 453.74 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 366 | 453.83 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 4 | 2 |
| 444 | 454.48 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 9 |
| 455 | 454.58 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 2 |
| 457 | 454.60 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 10 |
| 522 | 455.06 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 603 | 455.63 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 12 | 5 |
| 604 | 455.63 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 12 | 5 |
| 618 | 455.71 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 4 |
| 631 | 455.76 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 12 | 2 |
| 662 | 455.98 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 668 | 456.01 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 669 | 456.01 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 694 | 456.18 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 2 |
| 698 | 456.19 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 8 | 14 |
| 699 | 456.20 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 12 | 5 |
| 711 | 456.35 | wind | 7.0 | 14400 | < th | dose dependent | sin | 9 | NA |
| 736 | 456.53 | wind | 1.0 | 14400 | > th | dose dependent | sin | 9 | NA |
| 740 | 456.56 | wind | 3.0 | 14400 | > th | dose independent | sin | 9 | NA |
| 786 | 456.96 | wind | 3.0 | 14400 | < th | dose independent | sin | 9 | NA |
| 791 | 456.98 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 12 | 10 |
| 800 | 457.03 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 7 | 3 |
| 801 | 457.03 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 7 | 3 |
| 875 | 457.68 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 8 | 14 |
| 898 | 457.86 | temperature | 20.0 | 90 | < th | dose independent | rect. | 7 | 20 |
| 963 | 458.18 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 978 | 458.25 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 9 | 8 |
| 993 | 458.34 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 12 | 10 |