Os08g0101800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF821, CAP10-like family protein.
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Os08g0101800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF821, CAP10-like family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67.48 | 0.386 | 9.04 | 3.91 | 0.682 | 0.424 | -0.816 | 0.205 | 1.17 | 4.59 | 21.45 | 27 | -- | -- |
| 67.64 | 0.383 | 9.03 | 3.91 | 0.679 | 0.436 | -0.735 | -- | 1.17 | 4.66 | 21.5 | 26 | -- | -- |
| 69.07 | 0.387 | 9.03 | 3.91 | 0.697 | 0.432 | -- | 0.125 | 1.17 | 4.7 | 21.86 | 23 | -- | -- |
| 69 | 0.387 | 9.03 | 3.92 | 0.676 | 0.433 | -- | -- | 1.17 | 4.66 | 21.83 | 23 | -- | -- |
| 77.96 | 0.411 | 9.05 | 4.06 | -- | 0.766 | -- | -0.829 | 1.2 | -- | 6.078 | 395 | -- | -- |
| 74.85 | 0.406 | 9.04 | 3.86 | 0.86 | -- | -0.62 | -- | 1.15 | 3.48 | -- | -- | -- | -- |
| 76.04 | 0.408 | 9.04 | 3.87 | 0.856 | -- | -- | -- | 1.15 | 3.43 | -- | -- | -- | -- |
| 77.25 | 0.409 | 9.05 | 3.95 | -- | 0.721 | -- | -- | 1.18 | -- | 5.04 | 344 | -- | -- |
| 462.93 | 1.01 | 9.13 | -- | 0.855 | 0.559 | -- | -- | 0.734 | 3.79 | 50 | 8 | -- | -- |
| 117.18 | 0.506 | 9.04 | 3.9 | -- | -- | -- | -- | 1.17 | -- | -- | -- | -- | -- |
| 470.27 | 1.01 | 9.14 | -- | 0.932 | -- | -- | -- | 0.721 | 3.41 | -- | -- | -- | -- |
| 469.58 | 1.01 | 9.08 | -- | -- | 0.749 | -- | -- | 0.842 | -- | 9.28 | 264 | -- | -- |
| 519.15 | 1.06 | 9.14 | -- | -- | -- | -- | -- | 0.741 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.58 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 4 | 59.72 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 19 | 5 |
| 22 | 60.77 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 19 | 4 |
| 25 | 60.79 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 29 | 60.95 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 31 | 60.98 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 40 | 61.17 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 78 | 61.78 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 16 |
| 88 | 61.87 | atmosphere | 1005 | 43200 | < th | dose independent | sin | 12 | NA |
| 91 | 61.89 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 18 | 20 |
| 96 | 61.92 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 12 |
| 166 | 62.23 | humidity | 90 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 173 | 62.26 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 18 | 20 |
| 180 | 62.28 | humidity | 90 | 14400 | > th | dose dependent | sin | 2 | NA |
| 191 | 62.31 | humidity | 90 | 14400 | < th | dose independent | rect. | 3 | 6 |
| 197 | 62.33 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 9 | 21 |
| 233 | 62.40 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 3 | 23 |
| 235 | 62.41 | atmosphere | 1005 | 43200 | > th | dose independent | sin | 12 | NA |
| 236 | 62.41 | atmosphere | 1005 | 43200 | < th | dose independent | no | NA | NA |
| 265 | 62.45 | humidity | 90 | 14400 | > th | dose independent | rect. | 4 | 5 |
| 286 | 62.48 | humidity | 90 | 14400 | > th | dose independent | rect. | 3 | 9 |
| 307 | 62.52 | humidity | 90 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 447 | 62.79 | atmosphere | 1005 | 43200 | < th | dose independent | sin | 2 | NA |
| 516 | 62.87 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 8 | 22 |
| 569 | 62.96 | atmosphere | 1005 | 43200 | > th | dose independent | no | NA | NA |
| 602 | 62.99 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 3 | 23 |
| 611 | 63.01 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 627 | 63.03 | atmosphere | 1005 | 43200 | > th | dose independent | sin | 4 | NA |
| 637 | 63.04 | humidity | 90 | 14400 | > th | dose independent | sin | 4 | NA |
| 652 | 63.05 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 24 | 23 |
| 687 | 63.09 | temperature | 15 | 270 | > th | dose independent | rect. | 6 | 9 |
| 693 | 63.10 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 802 | 63.25 | humidity | 90 | 14400 | < th | dose independent | sin | 4 | NA |
| 806 | 63.25 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 884 | 63.39 | temperature | 20 | 90 | > th | dose independent | rect. | 21 | 18 |
| 904 | 63.42 | radiation | 30 | 43200 | < th | dose independent | rect. | 17 | 5 |
| 964 | 63.50 | wind | 1 | 43200 | < th | dose dependent | rect. | 13 | 4 |
| 989 | 63.55 | temperature | 20 | 90 | > th | dose independent | rect. | 23 | 16 |