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Os07g0694700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : L-ascorbate peroxidase.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 14.9 (0.0221) R2 : 0.849
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -2.2 (0.0434) R2dE : 0.848 R2E : 0.849
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0523 (0.0465) R2dN8 : 0.00054 R2N8 : 0.00109
σ : 0.415
deviance : 79.31
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_____
C
peak time of C : --
E
wheather : radiation
threshold : 2.752
memory length : 191
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
77.09 0.413 14.9 -0.03 0.8 -1.67 0.237 -0.699 0.046 15.6 6.013 112 -- --
76.27 0.407 14.9 -0.0976 0.707 -1.67 0.832 -- 0.00701 14.9 3.977 142 -- --
75.02 0.403 14.9 -0.0602 0.545 -1.86 -- -0.765 0.0462 16.1 3.919 135 -- --
77.94 0.411 14.9 -0.0671 0.435 -1.96 -- -- 0.0177 16.6 3.236 147 -- --
75.91 0.406 14.9 -0.0749 -- -2.2 -- -0.683 0.0435 -- 2.801 191 -- --
113.27 0.499 14.8 -0.021 2.58 -- 1.06 -- 0.135 13.6 -- -- -- --
117.78 0.508 14.8 0.0139 2.58 -- -- -- 0.141 13.6 -- -- -- --
78.95 0.414 14.9 -0.117 -- -2.2 -- -- 0.0388 -- 2.718 191 -- --
78.03 0.411 14.9 -- 0.425 -1.97 -- -- 0.0477 16.5 3.363 149 -- --
525.21 1.07 14.9 -0.0901 -- -- -- -- 0.084 -- -- -- -- --
117.79 0.508 14.8 -- 2.58 -- -- -- 0.139 13.6 -- -- -- --
79.31 0.415 14.9 -- -- -2.2 -- -- 0.0523 -- 2.752 191 -- --
525.42 1.07 14.9 -- -- -- -- -- 0.094 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 79.06 radiation 1.0 90 > th dose independent rect. 6 13
12 80.18 radiation 10.0 90 < th dose dependent rect. 18 23
14 81.89 temperature 10.0 30 > th dose dependent rect. 6 13
17 82.51 humidity 90.0 10 < th dose independent rect. 6 13
22 83.38 precipitation 0.1 720 < th dose independent rect. 4 14
23 83.38 precipitation 0.1 720 < th dose dependent rect. 4 14
24 83.47 radiation 1.0 270 < th dose dependent rect. 22 23
31 84.14 temperature 20.0 90 > th dose independent rect. 6 12
32 84.18 radiation 10.0 90 < th dose dependent rect. 10 22
38 84.44 radiation 1.0 90 < th dose independent rect. 17 23
52 84.61 radiation 1.0 90 > th dose independent no NA NA
98 84.62 radiation 1.0 90 < th dose independent rect. 10 22
100 84.63 radiation 1.0 90 < th dose independent no NA NA
102 84.65 radiation 1.0 90 < th dose independent rect. 12 23
103 84.69 radiation 1.0 720 < th dose dependent rect. 1 19
112 84.85 radiation 10.0 90 < th dose dependent rect. 7 23
113 84.87 radiation 1.0 270 > th dose independent rect. 18 23
114 84.89 radiation 1.0 270 < th dose independent rect. 22 23
117 85.06 radiation 1.0 90 < th dose independent rect. 15 23
144 85.26 precipitation 0.1 720 < th dose independent rect. 13 5
145 85.26 precipitation 0.1 720 < th dose dependent rect. 13 5
147 85.28 radiation 1.0 720 < th dose dependent rect. 1 14
149 85.31 radiation 1.0 90 > th dose independent rect. 15 23
151 85.34 radiation 10.0 90 < th dose dependent no NA NA
166 85.59 radiation 1.0 90 < th dose independent rect. 7 23
167 85.61 radiation 1.0 90 < th dose independent rect. 1 23
171 85.70 radiation 10.0 90 < th dose dependent rect. 15 23
187 86.13 temperature 15.0 30 > th dose dependent rect. 6 21
209 86.49 radiation 1.0 90 > th dose independent rect. 13 23
220 86.77 temperature 15.0 720 > th dose independent rect. 6 11
299 86.95 radiation 1.0 720 < th dose independent rect. 1 19
349 87.78 humidity 50.0 30 > th dose dependent rect. 10 20
350 87.79 temperature 30.0 10 < th dose dependent rect. 3 13
354 87.84 precipitation 0.1 720 < th dose independent rect. 21 21
355 87.84 precipitation 0.1 720 < th dose dependent rect. 21 21
356 87.85 temperature 15.0 720 > th dose independent rect. 21 21
367 87.94 radiation 1.0 720 < th dose independent rect. 1 14
381 88.12 radiation 10.0 90 < th dose dependent rect. 18 14
420 88.42 temperature 15.0 720 > th dose independent rect. 5 4
425 88.49 radiation 1.0 90 < th dose independent rect. 17 15
454 88.75 radiation 1.0 720 < th dose independent rect. 1 5
455 88.76 temperature 10.0 720 > th dose dependent rect. 6 2
475 88.88 radiation 1.0 270 > th dose independent rect. 11 23
485 89.01 radiation 1.0 90 < th dose independent rect. 3 23
515 89.25 radiation 1.0 720 > th dose independent rect. 13 20
521 89.31 radiation 1.0 720 > th dose independent rect. 6 10
529 89.37 precipitation 0.1 720 < th dose independent rect. 6 11
530 89.37 precipitation 0.1 720 < th dose dependent rect. 6 11
531 89.38 temperature 15.0 720 > th dose independent rect. 22 19
550 89.51 radiation 40.0 720 < th dose dependent rect. 16 14
556 89.58 temperature 25.0 10 < th dose dependent sin 1 NA
558 89.60 radiation 1.0 720 < th dose dependent rect. 1 5
604 89.97 radiation 1.0 720 < th dose dependent sin 3 NA
609 90.05 temperature 15.0 720 > th dose independent rect. 6 2
616 90.09 temperature 15.0 720 > th dose independent rect. 9 21
619 90.10 temperature 30.0 10 < th dose dependent rect. 3 19
653 90.27 precipitation 0.1 720 < th dose independent rect. 11 7
655 90.27 precipitation 0.1 720 < th dose dependent rect. 11 7
658 90.35 radiation 10.0 270 < th dose dependent rect. 16 13
665 90.38 temperature 15.0 720 > th dose independent rect. 1 12
678 90.50 temperature 10.0 270 > th dose independent rect. 13 12
679 90.50 atmosphere 995.0 270 > th dose independent rect. 1 12
680 90.50 atmosphere 1015.0 270 < th dose independent rect. 1 12
684 90.52 radiation 20.0 90 < th dose dependent sin 11 NA
742 90.94 wind 9.0 720 < th dose independent rect. 18 11
743 90.94 radiation 10.0 270 < th dose independent rect. 17 12
757 91.02 temperature 10.0 720 > th dose independent rect. 18 11
758 91.02 humidity 50.0 720 > th dose independent rect. 18 11
764 91.02 atmosphere 1015.0 720 < th dose independent rect. 5 13
774 91.06 wind 9.0 720 < th dose independent rect. 1 5
780 91.07 temperature 10.0 720 > th dose independent rect. 1 5
781 91.07 temperature 30.0 720 < th dose independent rect. 1 5
782 91.07 humidity 50.0 720 > th dose independent rect. 1 5
785 91.07 atmosphere 995.0 720 > th dose independent rect. 1 5
786 91.07 radiation 20.0 720 < th dose independent rect. 1 5
790 91.07 temperature 10.0 720 > th dose independent rect. 6 19
793 91.08 atmosphere 1015.0 720 < th dose independent rect. 6 11
794 91.08 temperature 10.0 720 > th dose independent rect. 17 13
800 91.10 wind 9.0 720 < th dose independent rect. 18 19
813 91.12 wind 7.0 90 < th dose independent rect. 6 12
819 91.15 precipitation 0.1 270 < th dose independent rect. 13 12
820 91.15 precipitation 0.1 270 < th dose dependent rect. 13 12
828 91.17 wind 9.0 90 < th dose dependent rect. 6 12
831 91.19 temperature 10.0 720 > th dose independent rect. 13 5
832 91.19 atmosphere 1015.0 720 < th dose independent rect. 13 5
834 91.19 temperature 10.0 720 > th dose independent rect. 18 19
843 91.23 wind 9.0 720 < th dose independent rect. 17 13
849 91.27 radiation 20.0 720 < th dose dependent rect. 17 4
851 91.27 radiation 1.0 90 < th dose dependent rect. 3 23
862 91.32 radiation 1.0 90 < th dose independent rect. 3 20
866 91.34 temperature 30.0 90 < th dose dependent rect. 1 22
897 91.49 wind 9.0 270 < th dose independent rect. 1 12
901 91.49 temperature 25.0 90 < th dose dependent rect. 1 20
910 91.56 temperature 25.0 90 > th dose independent rect. 23 19
944 91.70 temperature 10.0 270 > th dose dependent rect. 21 12
967 91.77 precipitation 0.1 720 < th dose independent rect. 6 3
968 91.77 precipitation 0.1 720 < th dose dependent rect. 6 3