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Os07g0693900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Armadillo-like helical domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.4 (0.0167) R2 : 0.443
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.661 (0.0405) R2dC : 0.326 R2C : 0.301
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.334 (0.0352) R2dN8 : 0.142 R2N8 : 0.118
σ : 0.315
deviance : 45.46
__
_____
C
peak time of C : 1.72
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
29.26 0.254 11.5 -0.336 1.1 -1.61 -1.71 1.22 0.368 19.6 1.43 701 -- --
30.4 0.257 11.5 -0.354 1.04 -1.54 -1.03 -- 0.36 19.8 1.434 704 -- --
34.74 0.275 11.5 -0.257 1.38 -2.03 -- 0.426 0.331 19.2 1.256 708 -- --
33.54 0.27 11.5 -0.305 1.34 -1.93 -- -- 0.371 19.2 1.32 700 -- --
35.01 0.276 11.5 -0.339 -- -0.611 -- 0.79 0.284 -- 0.65 237 -- --
38.73 0.292 11.5 -0.441 0.662 -- -0.754 -- 0.285 1.44 -- -- -- --
40.88 0.299 11.5 -0.417 0.668 -- -- -- 0.288 1.74 -- -- -- --
37.96 0.287 11.5 -0.368 -- -0.572 -- -- 0.313 -- 0.6481 237 -- --
35.39 0.277 11.5 -- 1.3 -1.9 -- -- 0.406 19.1 0.6685 692 -- --
68.03 0.385 11.5 -0.39 -- -- -- -- 0.303 -- -- -- -- --
45.46 0.315 11.4 -- 0.661 -- -- -- 0.334 1.72 -- -- -- --
41.59 0.3 11.4 -- -- -0.57 -- -- 0.343 -- 0.6485 232 -- --
72.03 0.396 11.4 -- -- -- -- -- 0.346 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 26.79 temperature 30 720 < th dose dependent rect. 17 4
2 26.91 temperature 30 720 < th dose dependent rect. 17 2
4 27.04 temperature 30 90 < th dose dependent rect. 17 13
8 27.31 temperature 30 10 < th dose dependent rect. 18 12
25 27.78 temperature 30 90 < th dose dependent sin 12 NA
41 28.04 temperature 30 720 < th dose dependent rect. 11 11
74 28.49 radiation 1 720 > th dose independent rect. 9 22
80 28.57 radiation 1 720 < th dose independent rect. 21 22
84 28.59 radiation 1 720 < th dose dependent rect. 17 2
90 28.64 temperature 25 720 < th dose independent rect. 15 7
103 28.78 radiation 1 720 > th dose independent rect. 15 16
108 28.80 radiation 1 720 < th dose independent rect. 16 14
109 28.81 radiation 1 720 < th dose independent sin 13 NA
110 28.81 radiation 1 720 < th dose independent rect. 15 17
111 28.81 radiation 1 720 < th dose independent rect. 23 20
112 28.81 temperature 10 720 > th dose dependent rect. 19 6
113 28.82 temperature 30 720 < th dose dependent sin 19 NA
130 28.90 radiation 1 720 < th dose dependent rect. 16 16
132 28.91 radiation 1 720 > th dose independent rect. 13 18
135 28.92 radiation 1 720 < th dose independent rect. 1 18
136 28.92 radiation 1 720 > th dose independent rect. 11 20
148 28.99 temperature 25 720 < th dose independent rect. 17 3
151 28.99 radiation 1 720 < th dose dependent rect. 21 22
154 29.00 radiation 1 720 < th dose dependent sin 13 NA
157 29.02 radiation 1 720 < th dose independent rect. 17 2
178 29.12 radiation 1 720 < th dose dependent rect. 16 21
188 29.18 radiation 1 720 > th dose independent rect. 13 23
217 29.27 radiation 1 720 > th dose independent rect. 15 23
221 29.28 radiation 1 720 < th dose dependent rect. 23 20
222 29.29 radiation 1 720 < th dose independent rect. 3 16
228 29.33 radiation 1 720 < th dose dependent rect. 1 18
233 29.36 radiation 1 720 > th dose independent sin 13 NA
239 29.37 temperature 10 30 > th dose dependent sin 9 NA
251 29.41 radiation 1 720 < th dose dependent rect. 3 16
253 29.42 radiation 1 720 < th dose independent rect. 1 23
263 29.45 radiation 1 720 < th dose independent rect. 7 23
264 29.45 temperature 10 720 > th dose dependent rect. 16 9
268 29.48 temperature 25 270 < th dose independent sin 16 NA
271 29.49 radiation 1 720 > th dose independent no NA NA
272 29.49 radiation 1 720 > th dose independent rect. 4 15
325 29.51 radiation 1 720 < th dose independent rect. 9 23
348 29.53 temperature 30 10 < th dose dependent rect. 12 18
369 29.56 radiation 1 720 < th dose independent no NA NA
372 29.56 temperature 10 270 > th dose dependent sin 11 NA
385 29.60 temperature 25 270 < th dose independent rect. 15 12
388 29.60 radiation 1 720 < th dose independent rect. 5 23
391 29.62 temperature 10 720 > th dose dependent sin 14 NA
400 29.66 temperature 25 720 < th dose independent rect. 10 13
406 29.67 radiation 1 720 < th dose dependent rect. 1 23
410 29.69 temperature 25 90 < th dose independent sin 13 NA
412 29.69 temperature 10 720 > th dose dependent rect. 13 12
437 29.75 radiation 1 720 < th dose independent rect. 3 23
452 29.78 temperature 15 720 > th dose dependent rect. 13 5
470 29.82 temperature 10 720 > th dose dependent rect. 11 7
476 29.83 radiation 1 720 < th dose dependent rect. 9 23
484 29.85 temperature 10 720 > th dose dependent rect. 13 10
511 29.90 radiation 1 720 < th dose dependent no NA NA
519 29.91 radiation 1 720 < th dose dependent rect. 7 23
546 29.97 radiation 1 720 < th dose dependent rect. 5 23
550 29.98 temperature 10 720 > th dose dependent rect. 15 16
553 29.99 radiation 1 720 > th dose independent rect. 17 23
565 30.01 humidity 80 43200 < th dose dependent rect. 4 4
578 30.03 radiation 1 720 < th dose dependent rect. 3 23
580 30.04 temperature 20 10 > th dose dependent sin 11 NA
602 30.08 temperature 10 720 > th dose dependent rect. 13 8
613 30.09 temperature 10 720 > th dose dependent rect. 11 14
628 30.12 temperature 15 270 > th dose dependent rect. 20 12
740 30.34 radiation 1 720 > th dose independent sin 23 NA
741 30.34 radiation 1 720 < th dose independent sin 22 NA
855 30.50 humidity 90 720 < th dose independent sin 22 NA
869 30.51 humidity 60 43200 < th dose independent rect. 5 3
889 30.53 temperature 25 720 < th dose independent sin 19 NA
891 30.53 humidity 90 14400 < th dose independent rect. 5 2
911 30.56 humidity 60 43200 > th dose independent rect. 5 3
934 30.59 radiation 1 720 < th dose independent rect. 5 17
941 30.60 wind 9 43200 > th dose independent rect. 18 2
947 30.60 humidity 60 43200 < th dose dependent rect. 5 3
954 30.61 radiation 1 720 < th dose independent sin 1 NA
955 30.61 humidity 90 14400 > th dose independent rect. 5 2
970 30.63 wind 9 43200 < th dose independent rect. 18 2