Os07g0693700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : WD40-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
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Os07g0693700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : WD40-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28.5 | 0.251 | 11 | -0.222 | 1.27 | -0.37 | -0.0862 | -2.18 | 0.36 | 1.79 | 0.7274 | 4680 | -- | -- |
| 31.12 | 0.26 | 11 | -0.164 | 1.3 | -0.628 | 0.0878 | -- | 0.394 | 1.75 | 1.228 | 2480 | -- | -- |
| 28.52 | 0.249 | 11 | -0.215 | 1.27 | -0.345 | -- | -2.1 | 0.36 | 1.79 | 0.8117 | 4680 | -- | -- |
| 30.95 | 0.259 | 11 | -0.184 | 1.29 | -0.598 | -- | -- | 0.365 | 1.79 | 1.44 | 2577 | -- | -- |
| 124.72 | 0.52 | 10.9 | -0.12 | -- | -0.0597 | -- | -2.89 | 0.37 | -- | 1.469 | 3323 | -- | -- |
| 37.04 | 0.285 | 11 | -0.0201 | 1.28 | -- | 0.00423 | -- | 0.324 | 1.8 | -- | -- | -- | -- |
| 37.04 | 0.285 | 11 | -0.0203 | 1.28 | -- | -- | -- | 0.324 | 1.8 | -- | -- | -- | -- |
| 127.45 | 0.526 | 11 | -0.195 | -- | -0.792 | -- | -- | 0.398 | -- | 1.904 | 2258 | -- | -- |
| 31.88 | 0.263 | 11 | -- | 1.27 | -0.54 | -- | -- | 0.375 | 1.8 | 1.064 | 2480 | -- | -- |
| 136.26 | 0.545 | 11 | 0.0321 | -- | -- | -- | -- | 0.353 | -- | -- | -- | -- | -- |
| 37.05 | 0.285 | 11 | -- | 1.28 | -- | -- | -- | 0.326 | 1.8 | -- | -- | -- | -- |
| 128.3 | 0.528 | 11 | -- | -- | -0.712 | -- | -- | 0.407 | -- | 1.61 | 2260 | -- | -- |
| 136.29 | 0.545 | 11 | -- | -- | -- | -- | -- | 0.349 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 26.07 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 14 |
| 2 | 26.09 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 14 |
| 3 | 26.09 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 14 |
| 4 | 26.18 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 2 | 15 |
| 5 | 26.19 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 13 |
| 22 | 26.40 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 10 |
| 26 | 26.49 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 10 |
| 29 | 26.54 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 3 | NA |
| 32 | 26.59 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 3 | NA |
| 34 | 26.59 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 3 | NA |
| 37 | 26.62 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 8 |
| 43 | 26.66 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 10 |
| 44 | 26.66 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 10 |
| 52 | 26.71 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 10 | 7 |
| 53 | 26.71 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 10 | 7 |
| 63 | 26.74 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 11 | 6 |
| 112 | 27.00 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 4 | NA |
| 129 | 27.11 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 150 | 27.18 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 2 |
| 151 | 27.18 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 2 |
| 154 | 27.18 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 2 |
| 164 | 27.22 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 2 |
| 170 | 27.25 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 16 |
| 175 | 27.27 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 16 |
| 179 | 27.27 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 16 |
| 197 | 27.34 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 200 | 27.34 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 214 | 27.38 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 11 |
| 216 | 27.38 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 11 |
| 218 | 27.39 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 11 |
| 223 | 27.41 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 13 |
| 226 | 27.42 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 13 |
| 227 | 27.42 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 13 |
| 230 | 27.43 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 19 |
| 231 | 27.43 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 19 |
| 232 | 27.43 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 6 |
| 236 | 27.43 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 19 |
| 348 | 27.76 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 23 |
| 446 | 27.91 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 467 | 27.94 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 474 | 27.95 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 17 |
| 475 | 27.95 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 24 | 20 |
| 487 | 27.97 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 488 | 27.97 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 489 | 27.97 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 492 | 27.97 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 582 | 28.08 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 627 | 28.13 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 6 | 4 |
| 641 | 28.16 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 672 | 28.19 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 702 | 28.24 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 735 | 28.29 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 22 |
| 739 | 28.30 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 741 | 28.30 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 22 |
| 744 | 28.30 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 22 |
| 751 | 28.31 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 785 | 28.35 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 18 | 23 |
| 789 | 28.36 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 5 |
| 791 | 28.36 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 18 | 23 |
| 792 | 28.36 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 18 | 23 |
| 820 | 28.42 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 880 | 28.49 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 23 |
| 881 | 28.49 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 23 |
| 886 | 28.49 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 23 |
| 889 | 28.50 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 10 |
| 895 | 28.50 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 11 |
| 903 | 28.51 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 912 | 28.52 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 22 |
| 913 | 28.52 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 12 | 22 |
| 919 | 28.52 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 23 |
| 922 | 28.52 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 926 | 28.52 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 12 | 22 |
| 929 | 28.52 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 23 |
| 932 | 28.53 | precipitation | 0.1 | 14400 | > th | dose independent | no | NA | NA |
| 933 | 28.53 | precipitation | 0.1 | 14400 | < th | dose independent | no | NA | NA |
| 941 | 28.53 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 23 |
| 942 | 28.53 | precipitation | 0.1 | 14400 | < th | dose dependent | no | NA | NA |