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Os07g0693000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Ser-thr protein kinase (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.55 (0.0316) R2 : 0.765
β1 : -2.91 (0.113) R2dD : 0.358 R2D : 0.247
β2 : 1.4 (0.0984) R2dC : 0.165 R2C : 0.276
β3 : 1.47 (0.13) R2dE : 0.112 R2E : 0.176
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.02 (0.0697) R2dN8 : 0.166 R2N8 : -0.0245
σ : 0.577
deviance : 153.35
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_____
C
peak time of C : 7.77
E
wheather : atmosphere
threshold : 1003
memory length : 49
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 3.57
open length of G : 5.72

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
149.03 0.574 6.56 -3.04 1.4 1.42 1.5 -1.94 -1.03 7.74 1003 71 3.17 5.95
152.23 0.575 6.56 -2.93 1.42 1.43 0.789 -- -1.03 7.85 1002 65 3.48 5.52
153.17 0.576 6.55 -2.96 1.43 1.42 -- -0.894 -1.02 7.75 1003 65 3.22 5.92
153.35 0.577 6.55 -2.91 1.4 1.47 -- -- -1.02 7.77 1003 49 3.57 5.72
200.99 0.66 6.59 -2.97 -- 1.98 -- -0.22 -0.98 -- 985.6 56 3.47 6.12
191.12 0.648 6.48 -2.86 2.11 -- 0.673 -- -0.765 7.34 -- -- -- --
192.35 0.649 6.48 -2.85 2.11 -- -- -- -0.766 7.33 -- -- -- --
200.49 0.659 6.57 -2.91 -- 1.98 -- -- -0.928 -- 983.5 59 3.43 6.12
376.97 0.904 6.48 -- 1.39 1.28 -- -- -0.653 7.78 1002 41 3.73 5.71
428.74 0.968 6.53 -2.81 -- -- -- -- -0.731 -- -- -- -- --
406.07 0.943 6.41 -- 2.08 -- -- -- -0.449 7.42 -- -- -- --
388.68 0.918 6.47 -- -- 2.17 -- -- -0.569 -- 970.1 349 0.764 7.88
637.31 1.18 6.46 -- -- -- -- -- -0.419 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 152.06 atmosphere 1000.0 90 > th dose dependent rect. 3 6
2 152.26 atmosphere 1005.0 10 > th dose dependent rect. 4 5
4 152.99 atmosphere 1005.0 90 > th dose independent rect. 3 6
15 155.60 atmosphere 1005.0 270 > th dose dependent rect. 3 3
16 155.99 atmosphere 1005.0 270 > th dose independent rect. 3 4
27 157.76 temperature 10.0 90 > th dose dependent rect. 3 6
38 159.70 precipitation 0.1 90 < th dose independent rect. 9 18
39 159.70 precipitation 0.1 90 < th dose dependent rect. 9 18
44 160.28 radiation 30.0 90 < th dose independent rect. 3 6
57 161.01 wind 9.0 90 < th dose independent rect. 9 18
58 161.06 radiation 30.0 90 < th dose independent rect. 3 8
69 161.50 precipitation 0.1 90 < th dose independent rect. 3 6
70 161.50 precipitation 0.1 90 < th dose dependent rect. 3 6
72 161.61 humidity 60.0 90 > th dose independent rect. 3 6
74 161.65 wind 5.0 90 < th dose independent rect. 3 6
78 161.76 atmosphere 995.0 90 > th dose independent rect. 9 18
86 161.94 temperature 10.0 90 > th dose independent rect. 3 6
89 161.94 atmosphere 995.0 90 > th dose independent rect. 3 6
90 161.94 atmosphere 1015.0 90 < th dose independent rect. 3 6
91 161.94 temperature 10.0 90 > th dose independent rect. 9 18
96 162.18 wind 9.0 90 < th dose dependent rect. 3 6
98 162.24 temperature 30.0 90 < th dose independent rect. 3 6
100 162.40 temperature 15.0 270 > th dose dependent rect. 3 4
111 163.31 wind 9.0 90 < th dose dependent rect. 9 18
123 163.76 temperature 10.0 90 > th dose dependent rect. 9 18
198 165.53 humidity 50.0 90 > th dose dependent rect. 3 6
202 165.59 atmosphere 1015.0 90 < th dose independent rect. 9 18
210 165.76 temperature 20.0 270 > th dose independent rect. 3 4
233 166.00 humidity 50.0 90 > th dose independent rect. 9 18
250 166.12 precipitation 0.1 270 < th dose independent rect. 5 22
252 166.12 precipitation 0.1 270 < th dose dependent rect. 5 22
256 166.21 radiation 40.0 90 < th dose dependent rect. 3 8
263 166.41 temperature 10.0 90 > th dose dependent rect. 23 4
274 166.61 radiation 40.0 90 < th dose dependent rect. 3 6
279 166.67 wind 9.0 90 < th dose dependent rect. 23 4
280 166.73 precipitation 0.1 270 < th dose independent rect. 7 20
281 166.73 precipitation 0.1 270 < th dose dependent rect. 7 20
291 166.94 radiation 40.0 90 < th dose independent rect. 3 20
313 167.14 temperature 10.0 1440 > th dose independent rect. 4 6
316 167.14 atmosphere 995.0 1440 > th dose independent rect. 4 6
317 167.14 atmosphere 1015.0 1440 < th dose independent rect. 4 6
318 167.14 temperature 10.0 1440 > th dose independent rect. 10 18
337 167.48 atmosphere 995.0 270 > th dose independent rect. 7 20
338 167.50 precipitation 0.1 270 < th dose independent rect. 3 2
339 167.50 humidity 90.0 10 > th dose dependent rect. 2 1
340 167.50 precipitation 0.1 270 < th dose dependent rect. 3 2
357 167.70 precipitation 0.1 270 < th dose independent rect. 3 4
359 167.70 precipitation 0.1 270 < th dose dependent rect. 3 4
368 167.77 temperature 15.0 90 > th dose independent rect. 23 4
369 167.77 humidity 50.0 90 > th dose dependent rect. 23 4
370 167.78 temperature 10.0 270 > th dose dependent rect. 23 1
376 167.83 radiation 10.0 270 < th dose independent rect. 3 4
377 167.83 wind 9.0 270 < th dose independent rect. 7 20
381 167.88 humidity 80.0 270 > th dose independent rect. 3 4
384 167.95 wind 5.0 270 < th dose independent rect. 3 4
390 168.02 wind 9.0 270 < th dose independent rect. 5 22
394 168.06 wind 5.0 90 < th dose independent rect. 23 4
398 168.06 temperature 30.0 90 < th dose independent rect. 23 4
399 168.06 humidity 50.0 90 > th dose independent rect. 23 4
402 168.06 atmosphere 995.0 90 > th dose independent rect. 23 4
403 168.06 radiation 1.0 90 < th dose independent rect. 23 4
409 168.06 temperature 10.0 90 > th dose independent rect. 3 20
410 168.06 radiation 1.0 90 < th dose dependent rect. 23 4
417 168.10 radiation 1.0 270 < th dose dependent rect. 3 2
419 168.11 precipitation 0.1 90 < th dose independent rect. 23 4
420 168.11 precipitation 0.1 90 < th dose dependent rect. 23 4
425 168.15 radiation 40.0 90 < th dose dependent rect. 3 22
427 168.16 temperature 30.0 10 < th dose dependent rect. 2 1
453 168.43 radiation 40.0 270 < th dose dependent rect. 3 4
455 168.46 temperature 10.0 270 > th dose independent rect. 3 4
457 168.46 temperature 30.0 270 < th dose independent rect. 3 4
458 168.46 humidity 50.0 270 > th dose independent rect. 3 4
460 168.46 atmosphere 995.0 270 > th dose independent rect. 3 4
461 168.46 atmosphere 1015.0 270 < th dose independent rect. 3 4
463 168.46 temperature 10.0 270 > th dose independent rect. 7 20
465 168.49 atmosphere 1015.0 10 < th dose dependent rect. 2 1
475 168.55 wind 3.0 30 < th dose dependent rect. 4 3
485 168.60 humidity 50.0 90 > th dose dependent rect. 3 8
486 168.61 atmosphere 1015.0 90 < th dose independent rect. 3 20
487 168.61 radiation 20.0 90 < th dose independent rect. 3 20
488 168.61 humidity 60.0 10 > th dose dependent rect. 2 1
491 168.62 temperature 10.0 270 > th dose independent rect. 3 2
493 168.62 temperature 30.0 270 < th dose independent rect. 3 2
494 168.62 humidity 50.0 270 > th dose independent rect. 3 2
497 168.62 atmosphere 995.0 270 > th dose independent rect. 3 2
498 168.62 atmosphere 1010.0 270 < th dose independent rect. 3 2
503 168.62 temperature 10.0 270 > th dose independent rect. 5 22
508 168.63 temperature 15.0 10 > th dose independent rect. 3 23
509 168.63 radiation 20.0 10 < th dose independent rect. 3 23
510 168.64 wind 9.0 10 < th dose independent rect. 2 1
511 168.64 temperature 10.0 10 > th dose independent rect. 2 1
513 168.64 temperature 30.0 10 < th dose independent rect. 2 1
514 168.64 humidity 50.0 10 > th dose independent rect. 2 1
517 168.64 atmosphere 995.0 10 > th dose independent rect. 2 1
518 168.64 atmosphere 1010.0 10 < th dose independent rect. 2 1
520 168.64 radiation 1.0 10 < th dose independent rect. 2 1
525 168.64 precipitation 0.1 10 < th dose independent rect. 2 1
527 168.64 radiation 1.0 10 < th dose dependent rect. 2 1
532 168.64 precipitation 0.1 10 < th dose dependent rect. 2 1
535 168.70 wind 5.0 10 < th dose independent rect. 2 1
537 168.70 radiation 40.0 90 < th dose independent rect. 3 22
546 168.75 wind 9.0 10 < th dose dependent rect. 2 1
548 168.75 radiation 40.0 90 < th dose dependent rect. 3 20
572 168.80 radiation 20.0 90 < th dose independent rect. 3 22
573 168.80 humidity 50.0 270 > th dose dependent rect. 3 2
591 168.95 wind 1.0 270 > th dose independent rect. 3 1
592 168.96 wind 1.0 270 > th dose independent rect. 2 5
603 169.00 radiation 1.0 270 < th dose independent rect. 3 16
604 169.00 temperature 10.0 10 > th dose dependent rect. 2 1
610 169.04 humidity 70.0 90 > th dose independent rect. 3 8
619 169.09 atmosphere 995.0 10 > th dose dependent rect. 2 1
621 169.11 radiation 20.0 10 < th dose independent rect. 3 21
632 169.17 humidity 50.0 270 > th dose dependent rect. 3 4
647 169.28 wind 9.0 90 < th dose independent rect. 3 20
652 169.31 atmosphere 1015.0 90 < th dose independent rect. 23 4
675 169.45 wind 9.0 90 < th dose dependent rect. 9 8
686 169.53 atmosphere 995.0 90 > th dose dependent rect. 1 2
694 169.56 wind 9.0 90 < th dose dependent rect. 11 16
699 169.59 radiation 20.0 10 < th dose independent rect. 4 18
701 169.60 radiation 30.0 90 < th dose independent rect. 17 16
703 169.61 humidity 50.0 270 > th dose independent rect. 7 20
757 169.83 radiation 40.0 90 < th dose independent rect. 3 10
759 169.84 atmosphere 995.0 90 > th dose dependent rect. 23 4
780 169.93 wind 1.0 30 > th dose independent rect. 2 1
784 169.95 precipitation 0.1 90 < th dose independent rect. 11 16
786 169.95 precipitation 0.1 90 < th dose dependent rect. 11 16
805 169.97 temperature 10.0 270 > th dose independent rect. 1 21
815 170.00 atmosphere 995.0 270 > th dose independent rect. 7 9
820 170.03 radiation 40.0 10 < th dose dependent rect. 4 5
823 170.04 radiation 40.0 10 < th dose dependent rect. 3 23
835 170.16 radiation 20.0 10 < th dose independent rect. 4 10
897 170.25 humidity 70.0 1440 < th dose independent rect. 16 2
902 170.26 radiation 1.0 270 < th dose dependent rect. 3 16
911 170.30 humidity 90.0 30 < th dose independent rect. 4 5
926 170.35 temperature 15.0 90 > th dose dependent rect. 1 2
930 170.37 temperature 10.0 270 > th dose dependent rect. 20 6
931 170.38 wind 9.0 270 < th dose independent rect. 7 9
932 170.39 temperature 20.0 30 > th dose independent rect. 4 3
958 170.50 precipitation 0.1 270 < th dose independent rect. 19 8
961 170.50 wind 9.0 30 < th dose dependent rect. 20 8
962 170.50 precipitation 0.1 270 < th dose dependent rect. 19 8
991 170.61 radiation 40.0 90 < th dose independent rect. 3 12
996 170.64 radiation 1.0 90 > th dose independent rect. 9 8
998 170.64 wind 3.0 30 < th dose dependent rect. 7 21