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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os07g0692500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3 (0.0135) R2 : 0.00879
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.057 (0.0283) R2dN8 : 0.0114 R2N8 : 0.00879
σ : 0.253
deviance : 29.49
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
27.94 0.248 2.88 0.58 0.0562 -5.68 -0.334 35.2 0.0465 5.77 995.1 1402 -- --
28.69 0.251 3 -0.117 0.0687 0.0713 -0.289 -- 0.0416 5.88 995.1 1402 -- --
28.17 0.247 2.89 0.526 0.058 -5.75 -- 35.7 0.0516 6.65 996 1295 -- --
28.22 0.247 3 -0.127 0.0591 0.37 -- -- 0.0472 6.25 997.5 1227 -- --
28.34 0.248 2.89 0.517 -- -5.79 -- 36 0.0494 -- 996.1 1270 -- --
28.7 0.251 3 -0.116 0.0676 -- -0.292 -- 0.0414 5.87 -- -- -- --
28.9 0.252 3 -0.118 0.0676 -- -- -- 0.0427 6.68 -- -- -- --
28.41 0.248 3 -0.132 -- 0.369 -- -- 0.0503 -- 997.5 1237 -- --
28.67 0.249 3 -- 0.0623 0.336 -- -- 0.0637 6.71 997.5 1206 -- --
29.14 0.252 3 -0.117 -- -- -- -- 0.0441 -- -- -- -- --
29.27 0.253 3 -- 0.0662 -- -- -- 0.0559 6.79 -- -- -- --
28.86 0.25 3 -- -- 0.341 -- -- 0.064 -- 997.3 1212 -- --
29.49 0.253 3 -- -- -- -- -- 0.057 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 26.57 atmosphere 1000.0 10 < th dose independent rect. 7 1
9 26.57 atmosphere 1000.0 10 < th dose dependent rect. 7 1
28 26.95 atmosphere 1005.0 90 > th dose dependent rect. 2 1
30 27.06 temperature 10.0 30 > th dose dependent rect. 3 23
31 27.08 atmosphere 1005.0 10 > th dose dependent rect. 2 2
34 27.17 wind 9.0 30 < th dose independent rect. 3 23
35 27.18 temperature 20.0 30 > th dose dependent rect. 2 1
36 27.18 radiation 1.0 43200 < th dose dependent rect. 3 1
37 27.19 temperature 20.0 30 > th dose independent rect. 2 1
38 27.20 atmosphere 1005.0 30 > th dose independent rect. 2 1
44 27.22 wind 3.0 30 < th dose independent rect. 2 1
48 27.23 humidity 80.0 30 > th dose independent rect. 2 1
49 27.23 wind 3.0 30 < th dose dependent rect. 2 1
57 27.24 wind 9.0 1440 < th dose independent rect. 3 1
58 27.24 temperature 10.0 1440 > th dose independent rect. 3 1
61 27.24 temperature 30.0 1440 < th dose independent rect. 3 1
65 27.24 humidity 50.0 1440 > th dose independent rect. 3 1
75 27.24 atmosphere 995.0 1440 > th dose independent rect. 3 1
76 27.24 radiation 1.0 1440 < th dose independent rect. 3 1
96 27.24 temperature 10.0 1440 > th dose independent rect. 4 23
100 27.24 radiation 1.0 1440 < th dose dependent rect. 3 1
115 27.25 temperature 10.0 30 > th dose independent rect. 2 1
117 27.25 temperature 30.0 30 < th dose independent rect. 2 1
118 27.25 humidity 50.0 30 > th dose independent rect. 2 1
122 27.25 atmosphere 1010.0 30 < th dose independent rect. 2 1
124 27.25 radiation 1.0 30 < th dose independent rect. 2 1
129 27.25 precipitation 0.1 30 < th dose independent rect. 2 1
130 27.25 temperature 10.0 30 > th dose independent rect. 3 23
131 27.25 humidity 50.0 30 > th dose dependent rect. 2 1
138 27.25 radiation 1.0 30 < th dose dependent rect. 2 1
143 27.25 precipitation 0.1 30 < th dose dependent rect. 2 1
154 27.28 atmosphere 1000.0 30 > th dose independent rect. 3 23
161 27.30 atmosphere 1015.0 30 < th dose dependent rect. 2 1
165 27.32 wind 1.0 30 > th dose independent rect. 2 1
168 27.33 temperature 30.0 30 < th dose dependent rect. 2 1
175 27.37 atmosphere 995.0 1440 > th dose independent rect. 3 12
180 27.38 humidity 90.0 90 < th dose independent rect. 2 1
185 27.39 precipitation 0.1 30 < th dose independent rect. 3 23
186 27.39 precipitation 0.1 30 < th dose dependent rect. 3 23
196 27.41 temperature 15.0 90 > th dose dependent rect. 3 16
198 27.41 temperature 10.0 30 > th dose dependent rect. 21 23
205 27.44 atmosphere 1000.0 90 < th dose dependent rect. 6 6
207 27.45 atmosphere 1015.0 720 < th dose independent rect. 3 8
256 27.50 atmosphere 995.0 10 > th dose dependent rect. 2 12
259 27.51 temperature 30.0 30 < th dose dependent rect. 2 10
269 27.53 radiation 30.0 90 > th dose independent rect. 7 1
285 27.53 precipitation 0.1 720 < th dose independent rect. 23 16
289 27.53 precipitation 0.1 720 < th dose dependent rect. 23 16
299 27.56 temperature 25.0 720 > th dose dependent rect. 3 2
313 27.59 temperature 25.0 10 < th dose independent rect. 2 10
319 27.60 atmosphere 1000.0 720 > th dose independent rect. 3 8
322 27.60 atmosphere 995.0 720 > th dose dependent rect. 2 1
324 27.60 atmosphere 995.0 10 > th dose dependent rect. 2 10
328 27.61 humidity 90.0 14400 > th dose independent rect. 2 7
340 27.62 humidity 90.0 14400 > th dose independent rect. 3 5
353 27.63 temperature 15.0 10 > th dose dependent rect. 23 21
356 27.64 temperature 25.0 720 > th dose independent rect. 3 2
357 27.64 temperature 25.0 720 > th dose independent rect. 3 4
358 27.64 humidity 90.0 14400 < th dose independent rect. 3 4
378 27.66 precipitation 0.1 720 < th dose independent rect. 3 8
382 27.66 precipitation 0.1 720 < th dose dependent rect. 3 8
390 27.67 atmosphere 1000.0 720 < th dose dependent rect. 24 8
400 27.68 radiation 30.0 90 > th dose dependent rect. 7 1
407 27.68 temperature 25.0 720 > th dose dependent rect. 1 7
424 27.69 humidity 90.0 14400 > th dose independent rect. 4 3
429 27.69 temperature 25.0 720 > th dose dependent rect. 2 5
458 27.71 temperature 15.0 720 > th dose independent rect. 7 8
472 27.71 atmosphere 1015.0 30 < th dose dependent rect. 3 23
475 27.72 atmosphere 1000.0 720 > th dose independent rect. 3 6
476 27.72 temperature 15.0 720 > th dose independent rect. 9 8
481 27.72 temperature 20.0 270 < th dose dependent rect. 3 7
491 27.72 atmosphere 1005.0 10 > th dose dependent rect. 2 21
498 27.73 temperature 15.0 720 > th dose independent rect. 3 12
499 27.73 atmosphere 995.0 1440 > th dose independent rect. 3 19
513 27.74 atmosphere 1000.0 90 < th dose independent rect. 3 5
514 27.74 atmosphere 1000.0 10 < th dose independent rect. 4 5
517 27.74 atmosphere 995.0 1440 > th dose independent rect. 3 21
518 27.74 radiation 10.0 30 < th dose independent rect. 3 23
520 27.74 atmosphere 1000.0 720 < th dose dependent rect. 1 2
538 27.75 humidity 80.0 14400 > th dose independent rect. 8 2
539 27.75 humidity 80.0 14400 > th dose independent rect. 7 4
542 27.75 temperature 15.0 1440 > th dose independent rect. 3 10
544 27.75 humidity 80.0 14400 > th dose dependent rect. 7 2
546 27.75 atmosphere 1000.0 10 < th dose dependent rect. 4 5
572 27.76 atmosphere 1000.0 270 < th dose independent rect. 4 1
586 27.76 temperature 15.0 1440 > th dose independent rect. 21 16
614 27.77 atmosphere 995.0 1440 > th dose independent rect. 12 10
617 27.77 temperature 15.0 720 > th dose independent rect. 5 16
619 27.77 humidity 50.0 10 > th dose independent rect. 3 23
621 27.77 temperature 10.0 270 > th dose dependent sin 5 NA
623 27.77 atmosphere 1000.0 720 < th dose dependent sin 8 NA
630 27.77 humidity 80.0 14400 > th dose dependent rect. 2 8
642 27.78 wind 9.0 720 < th dose independent rect. 3 8
646 27.78 atmosphere 995.0 1440 > th dose independent rect. 12 12
647 27.78 temperature 15.0 1440 > th dose independent rect. 8 14
648 27.78 temperature 15.0 720 > th dose independent rect. 3 16
656 27.78 wind 1.0 14400 < th dose dependent rect. 2 1
679 27.78 atmosphere 1000.0 10 < th dose dependent rect. 2 10
696 27.79 temperature 15.0 4320 > th dose independent rect. 21 1
697 27.79 radiation 1.0 1440 > th dose independent rect. 8 1
701 27.79 atmosphere 1000.0 10 < th dose independent rect. 2 7
705 27.79 temperature 15.0 1440 > th dose independent rect. 23 14
706 27.79 atmosphere 1015.0 720 < th dose independent rect. 3 16
710 27.79 temperature 30.0 270 < th dose dependent sin 5 NA
711 27.79 temperature 20.0 270 < th dose dependent sin 6 NA
735 27.80 temperature 15.0 1440 > th dose independent rect. 8 5
738 27.80 atmosphere 1000.0 10 < th dose independent rect. 7 5
752 27.80 atmosphere 995.0 1440 > th dose independent rect. 12 17
753 27.80 temperature 30.0 1440 > th dose independent rect. 15 20
755 27.80 temperature 10.0 30 > th dose dependent sin 4 NA
758 27.80 temperature 30.0 30 < th dose dependent sin 4 NA
761 27.80 temperature 30.0 1440 > th dose dependent rect. 15 1
781 27.80 temperature 30.0 270 < th dose dependent rect. 23 13
788 27.80 temperature 20.0 270 < th dose dependent rect. 3 18
798 27.81 atmosphere 1015.0 720 < th dose independent rect. 3 6
802 27.81 atmosphere 1000.0 720 > th dose independent rect. 21 8
806 27.81 atmosphere 995.0 1440 > th dose independent rect. 17 12
828 27.81 temperature 10.0 720 > th dose dependent rect. 3 6
858 27.81 temperature 30.0 10 < th dose dependent rect. 2 22
861 27.82 humidity 80.0 14400 < th dose independent rect. 8 3
872 27.82 atmosphere 995.0 1440 > th dose independent rect. 8 14
875 27.82 atmosphere 1010.0 90 < th dose independent rect. 3 23
886 27.82 humidity 80.0 14400 > th dose dependent rect. 4 2
891 27.82 humidity 80.0 14400 > th dose dependent rect. 3 4
927 27.82 atmosphere 1005.0 10 > th dose dependent rect. 11 17
934 27.83 humidity 50.0 10 < th dose independent rect. 15 1
935 27.83 atmosphere 1015.0 1440 < th dose independent rect. 3 1
937 27.83 temperature 15.0 1440 > th dose independent rect. 8 3
943 27.83 temperature 30.0 720 < th dose independent rect. 15 6
962 27.83 atmosphere 995.0 1440 > th dose independent rect. 8 16
970 27.83 atmosphere 995.0 1440 > th dose independent rect. 8 21
971 27.83 atmosphere 1010.0 10 < th dose independent rect. 4 22
973 27.83 atmosphere 1000.0 10 > th dose independent rect. 21 23
982 27.83 wind 9.0 720 < th dose dependent rect. 2 1
983 27.83 humidity 50.0 10 < th dose dependent rect. 15 1