Os07g0691600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Alcohol dehydrogenase (Fragment).
FiT-DB / Search/ Help/ Sample detail
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Os07g0691600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Alcohol dehydrogenase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74.44 | 0.405 | 2.84 | 0.0704 | 0.519 | 0.325 | -1.07 | -0.949 | -0.0376 | 12.2 | 0.04 | 90 | -- | -- |
| 75.77 | 0.405 | 2.86 | -0.0337 | 0.355 | 0.173 | -0.228 | -- | -0.0719 | 11.8 | 0.002454 | 84 | -- | -- |
| 75.71 | 0.408 | 2.85 | -0.00134 | 0.367 | 0.185 | -- | -0.139 | -0.0591 | 11.3 | 0.04 | 90 | -- | -- |
| 75.1 | 0.404 | 2.84 | -0.0107 | 0.508 | 0.305 | -- | -- | -0.0404 | 12.1 | 4.194e-06 | 84 | -- | -- |
| 77.09 | 0.409 | 2.86 | -0.029 | -- | -0.101 | -- | -0.143 | -0.0792 | -- | 14.2 | 40 | -- | -- |
| 76.69 | 0.411 | 2.85 | -0.0216 | 0.151 | -- | 0.0022 | -- | -0.0752 | 11.3 | -- | -- | -- | -- |
| 76.69 | 0.41 | 2.85 | -0.0215 | 0.151 | -- | -- | -- | -0.0752 | 11.3 | -- | -- | -- | -- |
| 77.15 | 0.409 | 2.86 | -0.0234 | -- | -0.108 | -- | -- | -0.0834 | -- | 19.67 | 36 | -- | -- |
| 75.07 | 0.404 | 2.84 | -- | 0.522 | 0.315 | -- | -- | -0.0394 | 12.3 | 4.267e-07 | 90 | -- | -- |
| 78.11 | 0.413 | 2.86 | -0.0253 | -- | -- | -- | -- | -0.0767 | -- | -- | -- | -- | -- |
| 76.7 | 0.41 | 2.85 | -- | 0.151 | -- | -- | -- | -0.0728 | 11.3 | -- | -- | -- | -- |
| 77.17 | 0.409 | 2.86 | -- | -- | -0.108 | -- | -- | -0.0798 | -- | 19.67 | 32 | -- | -- |
| 78.13 | 0.413 | 2.86 | -- | -- | -- | -- | -- | -0.0739 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.48 | humidity | 80 | 270 | > th | dose dependent | rect. | 12 | 1 |
| 3 | 66.59 | humidity | 90 | 270 | > th | dose independent | rect. | 11 | 2 |
| 4 | 66.77 | radiation | 1 | 270 | < th | dose independent | rect. | 12 | 2 |
| 5 | 66.77 | radiation | 1 | 270 | < th | dose dependent | rect. | 12 | 2 |
| 125 | 70.32 | radiation | 1 | 10 | < th | dose independent | rect. | 13 | 3 |
| 129 | 70.40 | wind | 1 | 10 | < th | dose dependent | rect. | 11 | 2 |
| 149 | 70.72 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 11 | 1 |
| 244 | 71.41 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 10 | 1 |
| 246 | 71.44 | wind | 1 | 10 | < th | dose independent | rect. | 11 | 2 |
| 253 | 71.45 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 11 | 1 |
| 287 | 71.73 | radiation | 20 | 270 | < th | dose independent | rect. | 12 | 1 |
| 343 | 72.25 | temperature | 25 | 90 | < th | dose independent | rect. | 13 | 3 |
| 353 | 72.29 | humidity | 80 | 90 | > th | dose independent | rect. | 15 | 1 |
| 380 | 72.42 | wind | 7 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 381 | 72.43 | wind | 7 | 90 | > th | dose independent | rect. | 8 | 1 |
| 393 | 72.47 | radiation | 20 | 270 | < th | dose independent | rect. | 11 | 3 |
| 401 | 72.50 | temperature | 25 | 270 | < th | dose independent | rect. | 11 | 4 |
| 450 | 72.64 | temperature | 30 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 453 | 72.66 | temperature | 25 | 270 | < th | dose independent | rect. | 12 | 1 |
| 460 | 72.69 | temperature | 25 | 90 | < th | dose independent | rect. | 14 | 1 |
| 471 | 72.73 | radiation | 20 | 270 | < th | dose dependent | rect. | 11 | 17 |
| 678 | 73.38 | radiation | 10 | 90 | < th | dose dependent | rect. | 19 | 22 |
| 696 | 73.46 | radiation | 1 | 270 | < th | dose independent | rect. | 11 | 18 |
| 732 | 73.54 | radiation | 20 | 270 | < th | dose independent | rect. | 11 | 17 |
| 764 | 73.62 | temperature | 20 | 270 | < th | dose independent | rect. | 9 | 1 |
| 768 | 73.62 | radiation | 40 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 800 | 73.64 | radiation | 1 | 90 | > th | dose independent | rect. | 7 | 23 |
| 900 | 73.77 | temperature | 30 | 270 | > th | dose independent | rect. | 8 | 1 |
| 917 | 73.78 | temperature | 30 | 270 | > th | dose dependent | rect. | 8 | 1 |
| 950 | 73.81 | wind | 7 | 90 | > th | dose independent | rect. | 14 | 1 |
| 970 | 73.84 | temperature | 30 | 90 | > th | dose independent | rect. | 10 | 1 |