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Os07g0689400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : TolB, C-terminal domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.4 (0.0233) R2 : 0.711
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.04 (0.061) R2dC : 0.715 R2C : 0.711
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -3.75e-05 (0.049) R2dN8 : 4.79e-10 R2N8 : -0.00347
σ : 0.439
deviance : 88.06
__
_____
C
peak time of C : 18.3
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
66.5 0.383 11.3 -0.204 2.07 0.448 -0.782 -1.82 0.0886 18.4 23.02 721 -- --
68.77 0.386 11.4 -0.426 2.04 0.918 -0.554 -- 0.0391 18.4 19.29 2209 -- --
67.74 0.383 11.3 -0.212 2.05 0.434 -- -1.72 0.0854 18.4 22.89 835 -- --
69.04 0.387 11.4 -0.316 2.03 1.07 -- -- 0.0474 18.4 19.17 2210 -- --
280.28 0.78 11.3 -0.296 -- 0.883 -- -1.45 0.0179 -- 20.39 1329 -- --
77.35 0.412 11.4 -0.623 2.04 -- -0.52 -- -0.0668 18.3 -- -- -- --
78 0.414 11.4 -0.618 2.04 -- -- -- -0.0688 18.3 -- -- -- --
278.97 0.778 11.3 -0.294 -- 1.3 -- -- 0.016 -- 18.7 2725 -- --
70.94 0.392 11.4 -- 2.03 1.26 -- -- 0.098 18.4 19.42 2249 -- --
293.11 0.8 11.3 -0.671 -- -- -- -- -0.112 -- -- -- -- --
88.06 0.439 11.4 -- 2.04 -- -- -- -3.75e-05 18.3 -- -- -- --
280.29 0.78 11.3 -- -- 1.54 -- -- 0.0769 -- 18.87 2746 -- --
305 0.815 11.3 -- -- -- -- -- -0.038 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 49.40 temperature 10.0 270 > th dose dependent rect. 3 4
2 49.63 wind 7.0 270 < th dose independent rect. 7 20
5 50.26 wind 7.0 270 < th dose independent rect. 8 18
6 50.48 temperature 10.0 270 > th dose dependent rect. 2 6
7 50.78 radiation 40.0 270 < th dose dependent rect. 15 16
8 50.91 radiation 10.0 270 < th dose independent rect. 3 4
9 50.97 radiation 20.0 270 < th dose independent rect. 15 16
12 51.15 humidity 70.0 270 > th dose independent rect. 3 4
17 51.28 wind 7.0 270 < th dose independent rect. 3 4
19 51.28 temperature 10.0 270 > th dose independent rect. 3 4
21 51.28 temperature 30.0 270 < th dose independent rect. 3 4
22 51.28 humidity 50.0 270 > th dose independent rect. 3 4
24 51.28 atmosphere 995.0 270 > th dose independent rect. 3 4
25 51.28 atmosphere 1015.0 270 < th dose independent rect. 3 4
27 51.28 temperature 10.0 270 > th dose independent rect. 7 20
28 51.28 radiation 40.0 270 < th dose dependent rect. 3 4
29 51.31 precipitation 0.1 270 < th dose independent rect. 3 4
30 51.31 precipitation 0.1 270 < th dose dependent rect. 3 4
34 51.49 temperature 15.0 270 > th dose independent rect. 15 16
35 51.49 temperature 10.0 270 > th dose dependent rect. 4 2
36 51.50 wind 9.0 270 < th dose independent rect. 7 8
39 51.76 temperature 10.0 270 > th dose independent rect. 7 8
40 51.76 atmosphere 1015.0 270 < th dose independent rect. 7 8
45 51.81 atmosphere 995.0 270 > th dose independent rect. 7 8
47 51.85 precipitation 0.1 270 < th dose independent rect. 7 20
48 51.85 precipitation 0.1 270 < th dose dependent rect. 7 20
49 51.88 precipitation 0.1 270 < th dose independent rect. 7 8
50 51.88 precipitation 0.1 270 < th dose dependent rect. 7 8
54 51.98 humidity 70.0 270 > th dose independent rect. 2 6
57 52.04 temperature 15.0 270 > th dose independent rect. 3 17
60 52.11 radiation 40.0 270 < th dose dependent rect. 2 7
63 52.18 radiation 30.0 270 < th dose independent rect. 2 6
65 52.20 atmosphere 995.0 270 > th dose independent rect. 15 16
68 52.22 wind 7.0 270 < th dose independent rect. 20 7
71 52.27 wind 9.0 270 < th dose independent rect. 2 6
72 52.27 temperature 10.0 270 > th dose independent rect. 2 6
74 52.27 temperature 30.0 270 < th dose independent rect. 2 6
75 52.27 humidity 50.0 270 > th dose independent rect. 2 6
77 52.27 atmosphere 995.0 270 > th dose independent rect. 2 6
78 52.27 atmosphere 1015.0 270 < th dose independent rect. 2 6
79 52.27 temperature 10.0 270 > th dose independent rect. 8 18
81 52.28 precipitation 0.1 270 < th dose independent rect. 2 6
82 52.28 precipitation 0.1 270 < th dose dependent rect. 2 6
86 52.42 humidity 50.0 270 > th dose dependent rect. 3 4
89 52.48 humidity 50.0 270 > th dose independent rect. 7 8
91 52.51 wind 9.0 270 < th dose independent rect. 6 22
94 52.57 wind 9.0 270 < th dose dependent rect. 3 4
101 52.67 precipitation 0.1 270 < th dose independent rect. 15 16
102 52.67 precipitation 0.1 270 < th dose dependent rect. 15 16
117 52.83 precipitation 0.1 270 < th dose independent rect. 8 18
118 52.83 precipitation 0.1 270 < th dose dependent rect. 8 18
129 52.97 wind 9.0 270 < th dose independent rect. 15 16
154 53.19 temperature 10.0 270 > th dose independent rect. 20 7
155 53.19 temperature 30.0 270 < th dose independent rect. 20 7
156 53.19 humidity 50.0 270 > th dose independent rect. 20 7
159 53.19 atmosphere 995.0 270 > th dose independent rect. 20 7
160 53.19 radiation 1.0 270 < th dose independent rect. 20 7
166 53.19 atmosphere 1015.0 270 < th dose independent rect. 3 17
167 53.19 radiation 1.0 270 < th dose dependent rect. 20 7
175 53.20 precipitation 0.1 270 < th dose independent rect. 20 7
177 53.20 precipitation 0.1 270 < th dose dependent rect. 20 7
207 53.54 wind 1.0 270 > th dose independent rect. 7 8
211 53.58 atmosphere 1010.0 270 < th dose independent rect. 4 2
244 53.64 humidity 50.0 270 > th dose independent rect. 7 20
251 53.68 radiation 10.0 270 < th dose dependent rect. 4 2
257 53.73 precipitation 0.1 270 < th dose independent rect. 3 17
258 53.73 precipitation 0.1 270 < th dose dependent rect. 3 17
313 53.94 wind 1.0 270 > th dose independent rect. 3 4
317 53.95 humidity 50.0 270 > th dose dependent rect. 2 7
343 54.11 radiation 1.0 270 > th dose independent rect. 7 8
352 54.22 temperature 15.0 10 > th dose independent rect. 17 16
388 54.41 atmosphere 995.0 270 > th dose independent rect. 3 17
394 54.45 wind 9.0 270 < th dose dependent rect. 20 6
405 54.50 temperature 15.0 270 > th dose independent rect. 12 10
421 54.57 wind 9.0 270 < th dose independent rect. 3 17
422 54.57 atmosphere 995.0 270 > th dose independent rect. 7 20
442 54.71 atmosphere 1015.0 270 < th dose independent rect. 15 16
506 54.90 atmosphere 995.0 90 > th dose independent rect. 9 19
511 54.92 humidity 50.0 270 > th dose dependent rect. 4 2
527 55.00 wind 9.0 270 < th dose dependent rect. 2 6
537 55.07 atmosphere 995.0 90 > th dose independent rect. 9 6
557 55.10 wind 9.0 270 < th dose dependent rect. 4 2
558 55.11 temperature 10.0 90 > th dose independent rect. 9 6
559 55.11 atmosphere 1015.0 90 < th dose independent rect. 9 6
563 55.13 radiation 1.0 90 < th dose dependent sin 11 NA
565 55.14 precipitation 0.1 90 < th dose independent rect. 9 6
566 55.14 precipitation 0.1 90 < th dose dependent rect. 9 6
577 55.23 atmosphere 1010.0 270 < th dose independent rect. 12 9
587 55.27 temperature 10.0 10 > th dose dependent rect. 15 18
595 55.30 wind 1.0 90 > th dose independent rect. 9 6
596 55.30 wind 9.0 90 < th dose independent rect. 9 6
614 55.43 radiation 1.0 90 > th dose independent rect. 9 6
625 55.47 temperature 15.0 270 > th dose independent rect. 1 21
626 55.48 temperature 10.0 1440 > th dose independent rect. 5 5
629 55.48 atmosphere 995.0 1440 > th dose independent rect. 5 5
630 55.48 atmosphere 1015.0 1440 < th dose independent rect. 5 5
631 55.48 temperature 10.0 1440 > th dose independent rect. 10 19
636 55.50 radiation 10.0 270 < th dose dependent rect. 3 9
642 55.52 atmosphere 995.0 10 > th dose independent rect. 9 8
646 55.54 temperature 10.0 270 > th dose independent rect. 22 14
647 55.54 atmosphere 995.0 270 > th dose independent rect. 22 14
649 55.54 temperature 10.0 10 > th dose dependent rect. 17 16
661 55.63 wind 9.0 270 < th dose independent rect. 22 14
693 55.71 atmosphere 995.0 270 > th dose dependent rect. 3 4
700 55.74 wind 1.0 270 > th dose independent rect. 7 19
703 55.75 atmosphere 995.0 10 > th dose independent rect. 17 16
717 55.82 radiation 1.0 10 > th dose independent rect. 9 6
719 55.83 temperature 10.0 1440 > th dose independent rect. 10 6
723 55.83 temperature 10.0 10 > th dose independent rect. 9 8
725 55.83 atmosphere 1015.0 10 < th dose independent rect. 9 8
726 55.83 precipitation 0.1 10 < th dose independent rect. 9 8
729 55.83 temperature 10.0 1440 > th dose independent rect. 16 18
733 55.83 precipitation 0.1 10 < th dose dependent rect. 9 8
747 55.86 precipitation 0.1 270 < th dose independent rect. 22 14
750 55.86 precipitation 0.1 270 < th dose dependent rect. 22 14
780 55.96 radiation 40.0 10 < th dose independent rect. 17 16
790 55.99 wind 9.0 270 < th dose dependent rect. 7 20
800 56.01 wind 9.0 270 < th dose dependent rect. 8 18
849 56.10 humidity 50.0 270 > th dose independent rect. 17 14
855 56.10 temperature 10.0 270 > th dose dependent rect. 15 16
864 56.13 radiation 1.0 90 < th dose independent sin 11 NA
865 56.13 wind 9.0 10 < th dose independent rect. 9 8
866 56.14 wind 9.0 10 < th dose independent rect. 9 6
868 56.14 radiation 1.0 10 > th dose independent rect. 9 8
907 56.20 wind 5.0 270 < th dose independent rect. 22 3
912 56.22 precipitation 0.1 10 < th dose independent rect. 17 16
915 56.22 radiation 20.0 4320 < th dose dependent rect. 23 6
916 56.22 precipitation 0.1 10 < th dose dependent rect. 17 16
942 56.30 wind 1.0 270 > th dose independent rect. 12 10
950 56.31 radiation 40.0 90 < th dose independent rect. 4 18
992 56.38 wind 9.0 10 < th dose independent rect. 17 16
994 56.39 humidity 50.0 270 > th dose independent rect. 22 14