Os07g0689300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase S16, ATP-dependent protease La family protein.
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Os07g0689300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase S16, ATP-dependent protease La family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 362.48 | 0.895 | 6.02 | 1.23 | 1.91 | 1.37 | 0.513 | 0.69 | -0.229 | 15.6 | 69.67 | 6597 | -- | -- |
| 363.18 | 0.888 | 6.02 | 1.2 | 1.91 | 1.4 | 0.515 | -- | -0.233 | 15.5 | 70 | 6601 | -- | -- |
| 363.26 | 0.888 | 6.02 | 1.24 | 1.91 | 1.36 | -- | 0.693 | -0.225 | 15.6 | 69.61 | 6601 | -- | -- |
| 363.99 | 0.889 | 6.02 | 1.21 | 1.91 | 1.4 | -- | -- | -0.234 | 15.5 | 70 | 6601 | -- | -- |
| 480.38 | 1.03 | 5.96 | 0.951 | -- | 1.16 | -- | 0.797 | -0.0697 | -- | 69.99 | 7664 | -- | -- |
| 394.02 | 0.931 | 5.98 | 1.09 | 1.94 | -- | 0.387 | -- | -0.0573 | 15.8 | -- | -- | -- | -- |
| 394.46 | 0.93 | 5.98 | 1.1 | 1.94 | -- | -- | -- | -0.0551 | 15.8 | -- | -- | -- | -- |
| 475.18 | 1.02 | 5.96 | 0.96 | -- | 1.19 | -- | -- | -0.0399 | -- | 71 | 7672 | -- | -- |
| 402.21 | 0.934 | 6.02 | -- | 1.88 | 1.16 | -- | -- | -0.298 | 15.6 | 69.38 | 6601 | -- | -- |
| 601.86 | 1.15 | 5.98 | 1.02 | -- | -- | -- | -- | -0.107 | -- | -- | -- | -- | -- |
| 426.25 | 0.966 | 6.01 | -- | 1.92 | -- | -- | -- | -0.177 | 15.8 | -- | -- | -- | -- |
| 499.45 | 1.04 | 5.98 | -- | -- | 1.2 | -- | -- | -0.145 | -- | 70 | 7686 | -- | -- |
| 629.19 | 1.17 | 6 | -- | -- | -- | -- | -- | -0.22 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 345.55 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 7 |
| 2 | 346.59 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 9 |
| 3 | 346.99 | wind | 1.0 | 14400 | > th | dose independent | rect. | 3 | 5 |
| 6 | 347.60 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 7 |
| 7 | 347.65 | wind | 1.0 | 14400 | > th | dose independent | rect. | 22 | 10 |
| 8 | 347.77 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 9 |
| 11 | 348.88 | wind | 1.0 | 14400 | < th | dose independent | rect. | 3 | 5 |
| 19 | 349.30 | wind | 1.0 | 14400 | < th | dose independent | rect. | 3 | 7 |
| 20 | 349.30 | wind | 1.0 | 14400 | < th | dose independent | rect. | 22 | 10 |
| 34 | 350.72 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 3 | 5 |
| 43 | 351.34 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 46 | 351.66 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 3 | 7 |
| 67 | 352.84 | wind | 1.0 | 14400 | < th | dose independent | rect. | 16 | 16 |
| 74 | 353.08 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 78 | 353.27 | wind | 1.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 80 | 353.37 | wind | 1.0 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 81 | 353.39 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 4 |
| 90 | 353.64 | wind | 1.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 99 | 353.85 | wind | 1.0 | 14400 | > th | dose independent | rect. | 16 | 16 |
| 140 | 355.06 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 11 |
| 141 | 355.12 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 142 | 355.15 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 143 | 355.15 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 2 |
| 147 | 355.38 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 2 |
| 151 | 355.44 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 152 | 355.44 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 153 | 355.44 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 4 |
| 155 | 355.52 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 172 | 355.87 | wind | 1.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 185 | 355.96 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 15 |
| 203 | 356.18 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 216 | 356.37 | wind | 1.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 250 | 356.90 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 252 | 356.92 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 268 | 357.10 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 296 | 357.49 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 298 | 357.49 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 302 | 357.57 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 6 |
| 316 | 357.74 | wind | 1.0 | 43200 | > th | dose independent | rect. | 17 | 18 |
| 327 | 357.83 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 10 |
| 333 | 357.88 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 349 | 357.96 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 7 | 2 |
| 353 | 358.00 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 9 |
| 367 | 358.10 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 10 |
| 483 | 359.01 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 503 | 359.24 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 8 |
| 507 | 359.25 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 12 | 8 |
| 509 | 359.25 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 12 | 8 |
| 510 | 359.26 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 10 |
| 520 | 359.31 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 2 |
| 525 | 359.33 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 10 |
| 527 | 359.33 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 10 |
| 579 | 359.62 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 597 | 359.71 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 11 |
| 599 | 359.71 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 11 |
| 601 | 359.73 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 13 |
| 613 | 359.80 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 11 |
| 623 | 359.83 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 13 |
| 626 | 359.83 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 13 |
| 647 | 359.90 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 15 |
| 650 | 359.92 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 651 | 359.92 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 15 |
| 652 | 359.92 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 15 |
| 673 | 360.02 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 15 |
| 701 | 360.14 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 710 | 360.15 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 13 |
| 737 | 360.29 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 13 |
| 740 | 360.29 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 13 |
| 752 | 360.34 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 23 |
| 769 | 360.43 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 1 | NA |
| 778 | 360.45 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 1 | NA |
| 779 | 360.45 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 1 | NA |
| 853 | 360.73 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 2 | NA |
| 857 | 360.74 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 20 |
| 945 | 361.05 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 952 | 361.07 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 20 |
| 956 | 361.09 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 1 |