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Os07g0687900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : WSI76 protein induced by water stress.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.38 (0.0649) R2 : 0.331
β1 : 0.951 (0.24) R2dD : 0.0271 R2D : -0.0288
β2 : 1.08 (0.17) R2dC : 0.0599 R2C : 0.0662
β3 : 2.13 (0.217) R2dE : 0.142 R2E : 0.178
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.02 (0.14) R2dN8 : 0.0921 R2N8 : 0.0923
σ : 1.21
deviance : 674.92
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C
peak time of C : 19.1
E
wheather : atmosphere
threshold : 999.5
memory length : 12
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 5.95
open length of G : 23.7

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
654.73 1.2 8.36 1.12 0.932 2.04 2.83 -2 0.912 20.5 999.9 29 6.05 23.3
662.32 1.2 8.37 1.08 0.929 2.02 2.41 -- 0.915 20.4 999.8 27 6.08 23.3
671.81 1.21 8.36 1.13 1.05 2.3 -- -2.27 0.931 19.4 1000 21 5.93 23.5
674.92 1.21 8.38 0.951 1.08 2.13 -- -- 1.02 19.1 999.5 12 5.95 23.7
724.72 1.25 8.34 1.09 -- 2.39 -- -1.95 0.88 -- 999.6 23 5.97 23.5
795.92 1.32 8.34 0.684 1.3 -- 2.41 -- 1.16 19.8 -- -- -- --
809.03 1.33 8.34 0.631 1.35 -- -- -- 1.17 19.1 -- -- -- --
727.47 1.26 8.36 0.968 -- 2.15 -- -- 0.916 -- 999.5 13 6 23.6
700.41 1.23 8.4 -- 1.01 2.01 -- -- 0.986 19.3 999.6 13 5.96 23.6
904.89 1.41 8.31 0.605 -- -- -- -- 1.15 -- -- -- -- --
819.52 1.34 8.35 -- 1.34 -- -- -- 1.1 19.1 -- -- -- --
750.25 1.28 8.38 -- -- 2.01 -- -- 0.807 -- 999.6 12 6.03 23.6
914.55 1.41 8.32 -- -- -- -- -- 1.08 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 660.32 radiation 10.0 14400 > th dose independent rect. 6 1
14 662.43 radiation 10.0 14400 > th dose independent rect. 17 15
15 663.85 wind 1.0 14400 < th dose independent rect. 10 2
30 665.31 atmosphere 1000.0 30 > th dose independent rect. 6 23
32 665.42 wind 1.0 14400 < th dose dependent rect. 10 1
33 666.13 wind 1.0 14400 > th dose independent rect. 10 2
49 669.60 temperature 30.0 14400 < th dose independent rect. 7 3
51 669.74 radiation 40.0 14400 > th dose dependent rect. 12 2
53 670.05 temperature 30.0 14400 < th dose independent rect. 5 5
69 670.17 wind 1.0 43200 < th dose dependent rect. 16 6
72 670.29 temperature 30.0 14400 < th dose independent rect. 19 15
78 670.69 temperature 30.0 14400 > th dose independent rect. 8 2
92 670.72 wind 3.0 14400 > th dose independent rect. 11 6
93 670.75 wind 3.0 14400 < th dose independent rect. 11 5
94 670.78 wind 3.0 14400 > th dose independent rect. 13 1
95 670.89 precipitation 0.1 43200 > th dose independent rect. 17 6
101 671.24 precipitation 0.1 43200 < th dose independent rect. 17 6
102 671.24 precipitation 0.1 43200 < th dose dependent rect. 17 6
107 671.55 precipitation 0.1 43200 > th dose dependent rect. 8 11
111 672.10 temperature 30.0 14400 > th dose dependent rect. 18 16
112 672.17 precipitation 0.1 43200 > th dose dependent rect. 8 15
113 672.19 wind 1.0 43200 > th dose independent rect. 16 7
115 672.26 radiation 40.0 14400 > th dose independent rect. 13 1
116 672.26 wind 1.0 43200 > th dose independent rect. 14 10
118 672.34 radiation 10.0 43200 > th dose independent rect. 8 5
122 672.37 precipitation 0.1 43200 < th dose independent rect. 17 8
123 672.37 precipitation 0.1 43200 < th dose dependent rect. 17 8
125 672.47 precipitation 0.1 43200 > th dose dependent rect. 8 17
127 672.55 radiation 10.0 43200 > th dose independent rect. 10 3
129 672.57 radiation 10.0 14400 > th dose independent sin 10 NA
149 672.90 wind 1.0 14400 > th dose independent rect. 2 1
159 673.04 precipitation 0.1 43200 > th dose independent rect. 19 3
162 673.12 precipitation 0.1 43200 > th dose independent rect. 12 10
166 673.22 precipitation 0.1 43200 > th dose independent rect. 8 14
178 673.37 precipitation 0.1 43200 > th dose dependent rect. 14 12
179 673.37 precipitation 0.1 43200 > th dose dependent rect. 12 14
194 673.54 precipitation 0.1 43200 < th dose independent rect. 19 3
196 673.54 precipitation 0.1 43200 < th dose dependent rect. 19 3
209 673.70 wind 1.0 43200 < th dose independent rect. 16 7
210 673.72 precipitation 0.1 43200 < th dose independent rect. 8 14
211 673.72 precipitation 0.1 43200 < th dose dependent rect. 8 14
213 673.74 wind 1.0 43200 > th dose independent rect. 2 3
218 673.78 temperature 30.0 14400 > th dose dependent rect. 8 2
258 673.92 precipitation 0.1 43200 > th dose independent rect. 8 11
289 674.20 precipitation 0.1 43200 > th dose dependent sin 20 NA
310 674.34 precipitation 0.1 43200 < th dose independent rect. 8 11
311 674.34 precipitation 0.1 43200 < th dose dependent rect. 8 11
315 674.38 precipitation 0.1 43200 < th dose independent rect. 14 5
316 674.38 precipitation 0.1 43200 < th dose dependent rect. 14 5
321 674.40 precipitation 0.1 43200 > th dose independent rect. 14 5
322 674.42 precipitation 0.1 43200 > th dose independent sin 20 NA
334 674.56 precipitation 0.1 43200 > th dose independent rect. 12 7
339 674.60 wind 1.0 43200 < th dose dependent rect. 2 4
350 674.68 precipitation 0.1 43200 < th dose independent sin 19 NA
351 674.68 precipitation 0.1 43200 < th dose dependent sin 19 NA
362 674.76 precipitation 0.1 43200 < th dose independent rect. 12 7
364 674.76 precipitation 0.1 43200 < th dose dependent rect. 12 7
368 674.81 wind 1.0 43200 > th dose independent rect. 1 5
382 674.95 precipitation 0.1 43200 > th dose dependent rect. 14 9
386 675.00 wind 1.0 43200 < th dose independent rect. 2 4
405 675.05 wind 1.0 43200 < th dose independent rect. 2 2
448 675.29 precipitation 0.1 43200 > th dose dependent rect. 17 9
453 675.33 wind 3.0 14400 < th dose independent rect. 13 1
520 675.92 temperature 25.0 4320 > th dose dependent sin 9 NA
537 676.09 temperature 30.0 1440 > th dose independent rect. 10 1
587 676.62 precipitation 0.1 43200 > th dose dependent rect. 19 4
594 676.67 radiation 40.0 14400 > th dose dependent rect. 12 20
615 676.73 wind 1.0 43200 < th dose independent rect. 15 9
619 676.74 radiation 40.0 14400 > th dose independent rect. 12 20
645 676.86 temperature 30.0 1440 < th dose independent rect. 10 1
713 677.47 precipitation 0.1 43200 > th dose dependent rect. 19 6
759 677.93 radiation 30.0 4320 > th dose dependent rect. 14 18
828 678.63 humidity 50.0 14400 > th dose independent rect. 17 16
890 678.95 radiation 10.0 14400 < th dose independent rect. 9 1
917 679.17 temperature 20.0 4320 > th dose dependent rect. 9 3
951 679.35 radiation 40.0 14400 < th dose independent rect. 13 1
981 679.69 temperature 30.0 1440 > th dose dependent rect. 12 1