Os07g0687400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : VQ domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0687400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : VQ domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 646.04 | 1.19 | 3.93 | 1.21 | 1.63 | 4.92 | 2.59 | 14.6 | 0.149 | 16.4 | 1.094 | 4320 | 18 | 0.908 |
| 697.2 | 1.23 | 4.08 | 2.19 | 1.97 | 5.12 | 2.56 | -- | 0.571 | 16.4 | 4.564 | 11526 | 17.7 | 0.835 |
| 663.91 | 1.2 | 3.92 | 1.23 | 1.64 | 4.97 | -- | 14.7 | 0.149 | 16.2 | 1.14 | 4320 | 18 | 0.896 |
| 691.75 | 1.22 | 4.07 | 2.81 | 1.82 | 4.98 | -- | -- | 0.693 | 16.4 | 4.255 | 11535 | 17.7 | 0.834 |
| 808.21 | 1.32 | 3.92 | 1.08 | -- | 5.09 | -- | 15.2 | 0.0538 | -- | 1.224 | 4320 | 18 | 0.867 |
| 1329.31 | 1.71 | 4.11 | 5.18 | 1.9 | -- | 3.11 | -- | 0.315 | 16.2 | -- | -- | -- | -- |
| 1356.18 | 1.72 | 4.1 | 5.21 | 1.91 | -- | -- | -- | 0.332 | 16 | -- | -- | -- | -- |
| 820.24 | 1.33 | 4.05 | 3.49 | -- | 5.18 | -- | -- | 0.965 | -- | 3.916 | 11548 | 17.6 | 0.85 |
| 847.79 | 1.36 | 4.08 | -- | 1.59 | 6 | -- | -- | 0.255 | 16.2 | 6.354 | 11527 | 17.7 | 1.02 |
| 1555.72 | 1.84 | 4.09 | 5.13 | -- | -- | -- | -- | 0.281 | -- | -- | -- | -- | -- |
| 2072.06 | 2.13 | 4.23 | -- | 1.81 | -- | -- | -- | -0.249 | 16.1 | -- | -- | -- | -- |
| 976.94 | 1.46 | 4.07 | -- | -- | 6.37 | -- | -- | 0.192 | -- | 6.365 | 11536 | 17.7 | 1 |
| 2250.95 | 2.21 | 4.22 | -- | -- | -- | -- | -- | -0.289 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 605.05 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 2 | 620.70 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 4 | 629.50 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 5 | 630.38 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 7 | 632.76 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 8 | 632.99 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 13 | 5 |
| 28 | 635.45 | radiation | 20.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 54 | 637.26 | wind | 5.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 57 | 637.65 | radiation | 30.0 | 14400 | < th | dose dependent | rect. | 18 | 11 |
| 67 | 638.25 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 18 | 7 |
| 93 | 640.37 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 123 | 642.85 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 15 | 5 |
| 133 | 643.62 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 135 | 643.69 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 142 | 644.07 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 143 | 644.07 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 145 | 644.19 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 164 | 645.44 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 167 | 645.68 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 182 | 646.09 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 7 |
| 187 | 646.26 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 199 | 646.84 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 15 | 4 |
| 202 | 646.95 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 212 | 647.36 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 222 | 647.90 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 231 | 648.32 | temperature | 10.0 | 14400 | > th | dose dependent | sin | 19 | NA |
| 239 | 648.49 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 20 | 6 |
| 292 | 650.29 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 18 | 9 |
| 298 | 650.42 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 318 | 651.13 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 13 | 14 |
| 334 | 651.82 | wind | 5.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 376 | 652.64 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 395 | 652.84 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 6 |
| 396 | 652.85 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 16 | 14 |
| 743 | 658.62 | temperature | 10.0 | 14400 | > th | dose dependent | no | NA | NA |
| 768 | 659.09 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 2 |
| 775 | 659.14 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 821 | 659.85 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 834 | 660.02 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 6 |
| 878 | 660.67 | temperature | 30.0 | 14400 | < th | dose dependent | sin | 18 | NA |
| 884 | 660.82 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 5 |
| 910 | 661.30 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 17 | 9 |