Os07g0687000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
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Os07g0687000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 239.32 | 0.727 | 3.33 | 1.47 | 0.548 | 0.85 | 0.314 | 1.27 | 1.06 | 17.8 | 46.96 | 1507 | -- | -- |
| 240.66 | 0.723 | 3.32 | 1.61 | 0.798 | 1.18 | 0.281 | -- | 1.1 | 17.8 | 21.46 | 1871 | -- | -- |
| 239.55 | 0.721 | 3.33 | 1.47 | 0.551 | 0.853 | -- | 1.26 | 1.07 | 17.8 | 47 | 1509 | -- | -- |
| 240.81 | 0.723 | 3.32 | 1.59 | 0.821 | 1.17 | -- | -- | 1.11 | 18 | 44 | 1881 | -- | -- |
| 252.74 | 0.74 | 3.32 | 1.46 | -- | 0.913 | -- | 1.3 | 1.06 | -- | 48 | 1384 | -- | -- |
| 266.1 | 0.765 | 3.33 | 1.57 | 0.544 | -- | 0.378 | -- | 1.05 | 17.8 | -- | -- | -- | -- |
| 266.45 | 0.764 | 3.33 | 1.57 | 0.546 | -- | -- | -- | 1.05 | 17.9 | -- | -- | -- | -- |
| 255.54 | 0.745 | 3.31 | 1.62 | -- | 1.03 | -- | -- | 1.08 | -- | 46 | 1379 | -- | -- |
| 306.27 | 0.815 | 3.35 | -- | 0.849 | 1.22 | -- | -- | 0.99 | 18.3 | 61.85 | 1986 | -- | -- |
| 281.92 | 0.785 | 3.32 | 1.55 | -- | -- | -- | -- | 1.04 | -- | -- | -- | -- | -- |
| 331.1 | 0.851 | 3.36 | -- | 0.523 | -- | -- | -- | 0.88 | 18 | -- | -- | -- | -- |
| 317.92 | 0.83 | 3.31 | -- | -- | 1.35 | -- | -- | 1.07 | -- | 82 | 1393 | -- | -- |
| 345.26 | 0.867 | 3.36 | -- | -- | -- | -- | -- | 0.87 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 233.13 | humidity | 90 | 14400 | < th | dose independent | rect. | 19 | 4 |
| 9 | 233.78 | humidity | 90 | 14400 | < th | dose independent | rect. | 7 | 17 |
| 10 | 233.91 | humidity | 90 | 14400 | > th | dose independent | rect. | 19 | 5 |
| 22 | 234.31 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 33 | 234.46 | humidity | 80 | 14400 | > th | dose dependent | rect. | 8 | 15 |
| 40 | 234.56 | humidity | 80 | 14400 | > th | dose independent | rect. | 8 | 7 |
| 49 | 234.63 | humidity | 90 | 14400 | > th | dose independent | rect. | 7 | 19 |
| 53 | 234.69 | humidity | 80 | 14400 | > th | dose independent | rect. | 8 | 10 |
| 64 | 234.81 | humidity | 90 | 14400 | < th | dose independent | sin | 19 | NA |
| 96 | 235.06 | humidity | 80 | 14400 | < th | dose independent | rect. | 8 | 10 |
| 99 | 235.10 | humidity | 80 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 106 | 235.13 | humidity | 80 | 14400 | > th | dose dependent | rect. | 17 | 2 |
| 108 | 235.15 | humidity | 80 | 14400 | < th | dose independent | rect. | 12 | 6 |
| 120 | 235.20 | humidity | 90 | 14400 | > th | dose independent | sin | 18 | NA |
| 121 | 235.20 | humidity | 80 | 14400 | > th | dose dependent | sin | 21 | NA |
| 132 | 235.25 | humidity | 80 | 14400 | < th | dose independent | rect. | 10 | 8 |
| 139 | 235.28 | humidity | 90 | 14400 | > th | dose dependent | rect. | 20 | 4 |
| 168 | 235.47 | humidity | 80 | 14400 | > th | dose dependent | rect. | 16 | 6 |
| 184 | 235.57 | humidity | 80 | 14400 | < th | dose independent | rect. | 8 | 7 |
| 222 | 235.73 | humidity | 80 | 14400 | > th | dose independent | rect. | 12 | 6 |
| 241 | 235.78 | humidity | 80 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 287 | 235.97 | humidity | 80 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 351 | 236.20 | humidity | 80 | 14400 | > th | dose independent | rect. | 12 | 3 |
| 361 | 236.23 | humidity | 80 | 14400 | > th | dose dependent | rect. | 8 | 3 |
| 362 | 236.23 | humidity | 70 | 14400 | > th | dose dependent | rect. | 9 | 6 |
| 400 | 236.39 | humidity | 80 | 14400 | > th | dose dependent | rect. | 7 | 7 |
| 415 | 236.43 | humidity | 70 | 14400 | < th | dose independent | rect. | 17 | 15 |
| 461 | 236.55 | humidity | 90 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 478 | 236.59 | humidity | 70 | 14400 | > th | dose independent | rect. | 17 | 15 |
| 483 | 236.61 | humidity | 80 | 14400 | > th | dose independent | sin | 23 | NA |
| 491 | 236.62 | humidity | 70 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 583 | 236.86 | humidity | 90 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 587 | 236.87 | humidity | 90 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 598 | 236.90 | humidity | 70 | 14400 | < th | dose independent | rect. | 17 | 5 |
| 625 | 236.95 | humidity | 80 | 14400 | > th | dose independent | rect. | 16 | 2 |
| 654 | 237.02 | humidity | 90 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 758 | 237.30 | humidity | 90 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 770 | 237.33 | humidity | 70 | 14400 | > th | dose independent | rect. | 17 | 8 |
| 773 | 237.33 | humidity | 70 | 14400 | > th | dose independent | rect. | 17 | 12 |
| 784 | 237.35 | humidity | 70 | 14400 | > th | dose independent | rect. | 17 | 5 |
| 872 | 237.58 | humidity | 80 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 927 | 237.68 | humidity | 70 | 14400 | < th | dose dependent | rect. | 16 | 17 |
| 985 | 237.80 | humidity | 90 | 14400 | < th | dose dependent | rect. | 14 | 5 |
| 994 | 237.82 | humidity | 90 | 14400 | > th | dose independent | rect. | 15 | 20 |