Os07g0686800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Serine/threonine protein kinase-like.
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Os07g0686800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Serine/threonine protein kinase-like.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 335.36 | 0.86 | 4.83 | 3.66 | 2.43 | -1.09 | 3.64 | -0.484 | 1.63 | 22.1 | 84.04 | 1337 | -- | -- |
| 335.69 | 0.853 | 4.83 | 3.68 | 2.44 | -1.12 | 3.59 | -- | 1.63 | 22.1 | 83.71 | 1329 | -- | -- |
| 381.53 | 0.91 | 4.84 | 3.38 | 2.76 | -1.19 | -- | 2.66 | 1.57 | 21.9 | 86.02 | 898 | -- | -- |
| 387.42 | 0.917 | 4.82 | 3.56 | 2.4 | -1.04 | -- | -- | 1.63 | 22.2 | 84.12 | 1335 | -- | -- |
| 665.13 | 1.21 | 4.77 | 3.43 | -- | -1.58 | -- | -1.77 | 1.62 | -- | 88 | 1536 | -- | -- |
| 365.41 | 0.896 | 4.82 | 3.54 | 2.37 | -- | 3.53 | -- | 1.66 | 21.9 | -- | -- | -- | -- |
| 413.63 | 0.952 | 4.82 | 3.4 | 2.35 | -- | -- | -- | 1.66 | 22 | -- | -- | -- | -- |
| 670.99 | 1.21 | 4.77 | 3.44 | -- | -1.63 | -- | -- | 1.62 | -- | 88 | 1536 | -- | -- |
| 523.21 | 1.07 | 4.97 | -- | 2.34 | -2.76 | -- | -- | 0.997 | 22.1 | 68 | 47520 | -- | -- |
| 745.22 | 1.28 | 4.76 | 3.43 | -- | -- | -- | -- | 1.66 | -- | -- | -- | -- | -- |
| 717.76 | 1.25 | 4.91 | -- | 2.36 | -- | -- | -- | 1.28 | 22.1 | -- | -- | -- | -- |
| 853.17 | 1.36 | 4.91 | -- | -- | -2.8 | -- | -- | 0.983 | -- | 67.37 | 47520 | -- | -- |
| 1054.82 | 1.52 | 4.84 | -- | -- | -- | -- | -- | 1.28 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 327.30 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 2 | 327.38 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 10 | 4 |
| 3 | 327.94 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 6 | 329.13 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 13 | 330.13 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 15 | 330.20 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 9 |
| 23 | 330.55 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 31 | 330.89 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 5 | 11 |
| 68 | 332.21 | humidity | 80.0 | 1440 | < th | dose independent | sin | 2 | NA |
| 88 | 332.93 | humidity | 80.0 | 1440 | > th | dose independent | sin | 2 | NA |
| 131 | 334.37 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 147 | 335.07 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 2 | 15 |
| 149 | 335.09 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 150 | 335.09 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 154 | 335.11 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 9 | 7 |
| 155 | 335.14 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 1 | 16 |
| 156 | 335.16 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 157 | 335.16 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 167 | 335.36 | wind | 1.0 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 172 | 335.43 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 15 | 1 |
| 190 | 335.71 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 9 | 7 |
| 217 | 336.03 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 244 | 336.26 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 2 | NA |
| 246 | 336.28 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 248 | 336.31 | humidity | 80.0 | 720 | > th | dose independent | rect. | 9 | 17 |
| 257 | 336.39 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 19 | 21 |
| 281 | 336.57 | humidity | 50.0 | 1440 | > th | dose dependent | sin | 2 | NA |
| 283 | 336.58 | wind | 1.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 302 | 336.68 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 19 | 22 |
| 337 | 336.86 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 10 | 22 |
| 353 | 336.95 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 456 | 337.32 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 5 |
| 485 | 337.40 | humidity | 80.0 | 1440 | < th | dose dependent | no | NA | NA |
| 492 | 337.41 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 7 | 23 |
| 495 | 337.42 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 4 | 12 |
| 497 | 337.42 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 505 | 337.43 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 514 | 337.45 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 618 | 337.63 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 628 | 337.65 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 646 | 337.67 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 5 |
| 678 | 337.74 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 683 | 337.74 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 8 |
| 790 | 338.01 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 13 | 19 |
| 814 | 338.09 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 823 | 338.12 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 9 | 21 |
| 914 | 338.34 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 8 |
| 950 | 338.41 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 9 | 18 |
| 973 | 338.46 | wind | 3.0 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 974 | 338.46 | wind | 1.0 | 1440 | > th | dose independent | rect. | 6 | 6 |