Os07g0686700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : RINT-1/TIP-1 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0686700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : RINT-1/TIP-1 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29.35 | 0.255 | 8.58 | 0.685 | 0.491 | 0.443 | -0.264 | -0.14 | 0.452 | 1.93 | 70 | 1285 | -- | -- |
| 29.05 | 0.251 | 8.58 | 0.674 | 0.506 | 0.463 | -0.245 | -- | 0.457 | 1.86 | 71 | 1263 | -- | -- |
| 29.29 | 0.252 | 8.57 | 0.672 | 0.486 | 0.44 | -- | -0.0882 | 0.453 | 1.87 | 71.37 | 1299 | -- | -- |
| 29.27 | 0.252 | 8.58 | 0.666 | 0.5 | 0.46 | -- | -- | 0.452 | 1.81 | 71.31 | 1269 | -- | -- |
| 36.28 | 0.282 | 8.58 | 0.622 | -- | 0.317 | -- | -0.14 | 0.404 | -- | 74 | 1650 | -- | -- |
| 36.37 | 0.283 | 8.59 | 0.562 | 0.413 | -- | -0.349 | -- | 0.381 | 2.03 | -- | -- | -- | -- |
| 36.82 | 0.284 | 8.59 | 0.573 | 0.412 | -- | -- | -- | 0.384 | 1.9 | -- | -- | -- | -- |
| 36.4 | 0.282 | 8.59 | 0.617 | -- | 0.317 | -- | -- | 0.402 | -- | 74 | 1650 | -- | -- |
| 40.45 | 0.296 | 8.6 | -- | 0.485 | 0.405 | -- | -- | 0.361 | 1.94 | 74 | 1307 | -- | -- |
| 47.07 | 0.321 | 8.59 | 0.59 | -- | -- | -- | -- | 0.393 | -- | -- | -- | -- | -- |
| 45.47 | 0.315 | 8.61 | -- | 0.422 | -- | -- | -- | 0.32 | 1.94 | -- | -- | -- | -- |
| 46.42 | 0.318 | 8.6 | -- | -- | 0.304 | -- | -- | 0.334 | -- | 74 | 1650 | -- | -- |
| 56.24 | 0.35 | 8.6 | -- | -- | -- | -- | -- | 0.328 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 28.47 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 2 | 28.49 | wind | 7.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 3 | 28.63 | wind | 7.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 4 | 28.76 | wind | 7.0 | 43200 | > th | dose independent | rect. | 15 | 6 |
| 5 | 28.77 | wind | 7.0 | 43200 | < th | dose independent | rect. | 15 | 6 |
| 6 | 28.87 | wind | 7.0 | 43200 | > th | dose independent | rect. | 15 | 3 |
| 7 | 28.88 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 19 | 3 |
| 8 | 28.90 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 8 | 7 |
| 10 | 28.93 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 11 | 28.95 | wind | 7.0 | 43200 | < th | dose independent | rect. | 15 | 3 |
| 12 | 28.95 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 15 | 29.00 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 8 | 12 |
| 17 | 29.01 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 23 | 29.06 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 18 | 3 |
| 24 | 29.07 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 13 |
| 26 | 29.09 | humidity | 70.0 | 1440 | > th | dose independent | sin | 16 | NA |
| 28 | 29.11 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 9 |
| 37 | 29.14 | humidity | 80.0 | 1440 | < th | dose independent | sin | 0 | NA |
| 41 | 29.15 | humidity | 80.0 | 1440 | > th | dose independent | sin | 0 | NA |
| 48 | 29.16 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 15 | 6 |
| 58 | 29.19 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 13 | 7 |
| 61 | 29.19 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 13 | 11 |
| 75 | 29.21 | humidity | 50.0 | 720 | > th | dose dependent | sin | 17 | NA |
| 76 | 29.21 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 15 | 8 |
| 77 | 29.22 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 5 |
| 87 | 29.24 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 9 |
| 106 | 29.26 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 123 | 29.27 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 15 | 6 |
| 130 | 29.29 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 11 | 12 |
| 134 | 29.30 | humidity | 60.0 | 720 | > th | dose dependent | sin | 19 | NA |
| 136 | 29.30 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 11 | 8 |
| 137 | 29.30 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 12 | 9 |
| 145 | 29.31 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 206 | 29.36 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 224 | 29.38 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 5 | 14 |
| 279 | 29.43 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 12 | 11 |
| 301 | 29.45 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 5 | 14 |
| 315 | 29.46 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 11 | 15 |
| 322 | 29.47 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 15 | 3 |
| 362 | 29.50 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 379 | 29.51 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 5 |
| 413 | 29.53 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 3 |
| 442 | 29.54 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 3 | 15 |
| 450 | 29.55 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 19 | NA |
| 535 | 29.59 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 12 |
| 565 | 29.60 | wind | 3.0 | 43200 | > th | dose dependent | sin | 23 | NA |
| 566 | 29.60 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 21 | NA |
| 648 | 29.63 | wind | 9.0 | 43200 | < th | dose dependent | sin | 1 | NA |
| 651 | 29.63 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 700 | 29.65 | wind | 7.0 | 43200 | < th | dose independent | sin | 18 | NA |
| 704 | 29.65 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 22 | 10 |
| 746 | 29.66 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 808 | 29.68 | wind | 5.0 | 43200 | > th | dose dependent | sin | 18 | NA |
| 863 | 29.70 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 2 |
| 875 | 29.70 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 898 | 29.71 | wind | 7.0 | 43200 | > th | dose independent | sin | 18 | NA |
| 899 | 29.71 | humidity | 70.0 | 720 | < th | dose independent | sin | 14 | NA |
| 900 | 29.71 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 5 |
| 901 | 29.71 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 5 |
| 907 | 29.71 | wind | 5.0 | 43200 | < th | dose independent | rect. | 5 | 15 |
| 914 | 29.71 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 5 |
| 952 | 29.72 | temperature | 30.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 978 | 29.73 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 10 |
| 986 | 29.73 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 3 | 21 |
| 994 | 29.73 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 5 |