Os07g0685900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Proteinase inhibitor, propeptide domain containing protein.
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Os07g0685900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Proteinase inhibitor, propeptide domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 205.68 | 0.674 | 3.66 | 1.93 | 0.43 | 1.86 | 2.08 | 0.223 | 0.19 | 6.82 | 26.58 | 837 | -- | -- |
| 205.73 | 0.668 | 3.66 | 1.97 | 0.43 | 1.85 | 2.12 | -- | 0.196 | 6.83 | 26.75 | 841 | -- | -- |
| 213.99 | 0.681 | 3.71 | 1.68 | 0.467 | 1.77 | -- | 1.23 | 0.081 | 9.97 | 26.03 | 498 | -- | -- |
| 216.52 | 0.685 | 3.67 | 1.95 | 0.42 | 1.74 | -- | -- | 0.176 | 9.74 | 26.49 | 567 | -- | -- |
| 221.05 | 0.692 | 3.69 | 1.83 | -- | 2.07 | -- | 1.12 | 0.169 | -- | 28.02 | 690 | -- | -- |
| 255.63 | 0.75 | 3.75 | 1.42 | 0.735 | -- | 1.58 | -- | -0.218 | 8.25 | -- | -- | -- | -- |
| 262.05 | 0.758 | 3.74 | 1.48 | 0.734 | -- | -- | -- | -0.215 | 9 | -- | -- | -- | -- |
| 222.14 | 0.694 | 3.68 | 2.04 | -- | 2.07 | -- | -- | 0.185 | -- | 30.1 | 719 | -- | -- |
| 306.16 | 0.819 | 3.74 | -- | 0.832 | 0.906 | -- | -- | -0.206 | 9.93 | 26.49 | 567 | -- | -- |
| 292.95 | 0.8 | 3.76 | 1.48 | -- | -- | -- | -- | -0.211 | -- | -- | -- | -- | -- |
| 319.54 | 0.836 | 3.78 | -- | 0.736 | -- | -- | -- | -0.38 | 8.85 | -- | -- | -- | -- |
| 318.97 | 0.832 | 3.77 | -- | -- | 1.34 | -- | -- | -0.203 | -- | 32.83 | 657 | -- | -- |
| 350.42 | 0.874 | 3.8 | -- | -- | -- | -- | -- | -0.375 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 198.87 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 2 | 199.10 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 15 |
| 6 | 199.33 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 18 |
| 12 | 199.75 | temperature | 30 | 720 | < th | dose dependent | sin | 11 | NA |
| 25 | 200.54 | temperature | 10 | 720 | > th | dose dependent | sin | 11 | NA |
| 100 | 203.82 | temperature | 25 | 4320 | < th | dose dependent | rect. | 2 | 2 |
| 107 | 203.93 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 7 |
| 137 | 204.52 | temperature | 10 | 4320 | > th | dose dependent | rect. | 2 | 2 |
| 177 | 204.90 | temperature | 10 | 1440 | > th | dose dependent | rect. | 19 | 12 |
| 250 | 205.19 | temperature | 10 | 4320 | > th | dose dependent | rect. | 22 | 6 |
| 332 | 205.38 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 4 |
| 495 | 205.79 | temperature | 25 | 4320 | < th | dose dependent | rect. | 5 | 1 |
| 540 | 205.92 | temperature | 10 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 846 | 206.60 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 23 |
| 855 | 206.62 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 12 |
| 983 | 206.91 | radiation | 1 | 43200 | > th | dose independent | rect. | 17 | 12 |
| 996 | 206.94 | humidity | 80 | 43200 | > th | dose independent | rect. | 17 | 1 |