Os07g0685800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glucose/ribitol dehydrogenase family protein.
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Os07g0685800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glucose/ribitol dehydrogenase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 84.74 | 0.432 | 7.43 | -0.945 | 1.11 | -1.66 | 0.223 | -0.13 | -0.0363 | 17.7 | 24.63 | 4055 | -- | -- |
| 84.74 | 0.429 | 7.43 | -0.974 | 1.11 | -1.64 | 0.221 | -- | -0.0398 | 17.7 | 24.46 | 4033 | -- | -- |
| 84.82 | 0.429 | 7.43 | -0.949 | 1.11 | -1.66 | -- | -0.135 | -0.0404 | 17.7 | 24.36 | 4035 | -- | -- |
| 84.85 | 0.429 | 7.43 | -0.975 | 1.11 | -1.64 | -- | -- | -0.0422 | 17.7 | 24.42 | 4034 | -- | -- |
| 99.31 | 0.464 | 7.41 | -0.738 | -- | -2.32 | -- | 0.258 | -0.0248 | -- | 31.59 | 341 | -- | -- |
| 129.5 | 0.533 | 7.34 | -0.134 | 1.05 | -- | 0.325 | -- | 0.389 | 17.9 | -- | -- | -- | -- |
| 129.76 | 0.533 | 7.34 | -0.137 | 1.05 | -- | -- | -- | 0.39 | 17.9 | -- | -- | -- | -- |
| 99.46 | 0.464 | 7.4 | -0.704 | -- | -2.31 | -- | -- | -0.0149 | -- | 31.49 | 344 | -- | -- |
| 98.47 | 0.462 | 7.39 | -- | 1.11 | -1.2 | -- | -- | 0.147 | 17.6 | 26.25 | 2586 | -- | -- |
| 187.39 | 0.64 | 7.32 | -0.168 | -- | -- | -- | -- | 0.366 | -- | -- | -- | -- | -- |
| 130.25 | 0.534 | 7.33 | -- | 1.06 | -- | -- | -- | 0.406 | 17.9 | -- | -- | -- | -- |
| 111.05 | 0.491 | 7.38 | -- | -- | -2.09 | -- | -- | 0.0998 | -- | 31.86 | 325 | -- | -- |
| 188.13 | 0.64 | 7.32 | -- | -- | -- | -- | -- | 0.385 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 81.89 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 4 | 83.18 | temperature | 15 | 270 | > th | dose dependent | sin | 5 | NA |
| 11 | 83.62 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 22 |
| 13 | 83.78 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 15 | 83.95 | temperature | 25 | 4320 | < th | dose dependent | rect. | 22 | 2 |
| 19 | 84.11 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 26 | 84.22 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 31 | 84.27 | temperature | 20 | 4320 | < th | dose independent | rect. | 16 | 15 |
| 33 | 84.29 | temperature | 20 | 4320 | < th | dose independent | rect. | 17 | 11 |
| 60 | 84.45 | temperature | 20 | 4320 | > th | dose independent | rect. | 16 | 15 |
| 65 | 84.49 | temperature | 20 | 4320 | > th | dose independent | rect. | 16 | 12 |
| 67 | 84.49 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 15 |
| 71 | 84.51 | temperature | 25 | 4320 | < th | dose dependent | sin | 12 | NA |
| 83 | 84.55 | temperature | 20 | 4320 | < th | dose independent | sin | 14 | NA |
| 143 | 84.74 | temperature | 20 | 4320 | > th | dose independent | sin | 14 | NA |
| 218 | 84.96 | temperature | 10 | 4320 | > th | dose dependent | rect. | 22 | 2 |
| 239 | 85.00 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 14 |
| 296 | 85.13 | temperature | 10 | 4320 | > th | dose dependent | rect. | 20 | 8 |
| 323 | 85.18 | temperature | 10 | 4320 | > th | dose dependent | rect. | 20 | 14 |
| 437 | 85.32 | temperature | 10 | 4320 | > th | dose dependent | sin | 9 | NA |
| 488 | 85.37 | temperature | 25 | 4320 | < th | dose dependent | no | NA | NA |
| 494 | 85.37 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 593 | 85.50 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 23 |
| 689 | 85.61 | temperature | 25 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 810 | 85.74 | temperature | 25 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 983 | 85.93 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |