Os07g0684400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0684400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 157.77 | 0.59 | 6.45 | -0.498 | 1.53 | 1.59 | 0.616 | -0.671 | 0.0729 | 17.9 | 28.5 | 1747 | -- | -- |
| 158.03 | 0.585 | 6.44 | -0.321 | 1.53 | 1.52 | 0.624 | -- | 0.109 | 17.9 | 28.5 | 1746 | -- | -- |
| 158.58 | 0.587 | 6.45 | -0.524 | 1.53 | 1.61 | -- | -0.802 | 0.0872 | 17.9 | 28.5 | 1746 | -- | -- |
| 158.83 | 0.587 | 6.43 | -0.32 | 1.54 | 1.52 | -- | -- | 0.129 | 17.9 | 28.5 | 1746 | -- | -- |
| 184.64 | 0.633 | 6.43 | -0.412 | -- | 2.27 | -- | -0.834 | 0.045 | -- | 28.4 | 431 | -- | -- |
| 247.94 | 0.738 | 6.38 | 0.182 | 1.75 | -- | 0.545 | -- | 0.393 | 18 | -- | -- | -- | -- |
| 248.66 | 0.738 | 6.38 | 0.177 | 1.75 | -- | -- | -- | 0.395 | 18 | -- | -- | -- | -- |
| 182.92 | 0.63 | 6.41 | -0.258 | -- | 2.17 | -- | -- | 0.0826 | -- | 28.29 | 402 | -- | -- |
| 161.26 | 0.591 | 6.43 | -- | 1.55 | 1.46 | -- | -- | 0.166 | 18 | 28.6 | 1746 | -- | -- |
| 407.01 | 0.943 | 6.35 | 0.126 | -- | -- | -- | -- | 0.356 | -- | -- | -- | -- | -- |
| 249.49 | 0.739 | 6.38 | -- | 1.75 | -- | -- | -- | 0.376 | 18 | -- | -- | -- | -- |
| 184.65 | 0.633 | 6.4 | -- | -- | 2.14 | -- | -- | 0.115 | -- | 28.24 | 400 | -- | -- |
| 407.42 | 0.942 | 6.35 | -- | -- | -- | -- | -- | 0.342 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 142.01 | temperature | 10 | 270 | > th | dose dependent | rect. | 21 | 22 |
| 4 | 142.37 | temperature | 15 | 270 | > th | dose dependent | rect. | 23 | 19 |
| 39 | 150.10 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 15 |
| 56 | 153.15 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 57 | 153.23 | temperature | 15 | 10 | > th | dose dependent | rect. | 2 | 18 |
| 60 | 153.63 | temperature | 20 | 270 | > th | dose dependent | rect. | 11 | 22 |
| 88 | 155.46 | temperature | 25 | 270 | > th | dose independent | rect. | 11 | 7 |
| 99 | 156.39 | temperature | 30 | 270 | < th | dose dependent | sin | 21 | NA |
| 104 | 156.55 | temperature | 20 | 270 | > th | dose dependent | rect. | 11 | 7 |
| 122 | 157.43 | temperature | 25 | 90 | > th | dose independent | rect. | 13 | 6 |
| 148 | 158.99 | temperature | 25 | 10 | > th | dose independent | rect. | 14 | 6 |
| 173 | 160.19 | temperature | 20 | 10 | > th | dose dependent | rect. | 14 | 6 |
| 177 | 160.30 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 20 |
| 181 | 160.40 | temperature | 20 | 1440 | > th | dose dependent | rect. | 8 | 19 |
| 214 | 160.90 | temperature | 20 | 1440 | > th | dose dependent | rect. | 14 | 22 |
| 221 | 160.95 | temperature | 20 | 1440 | > th | dose dependent | rect. | 22 | 22 |
| 223 | 160.96 | temperature | 20 | 270 | > th | dose dependent | sin | 22 | NA |
| 237 | 161.01 | temperature | 20 | 90 | > th | dose dependent | rect. | 13 | 7 |
| 246 | 161.05 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 276 | 161.24 | temperature | 20 | 1440 | > th | dose dependent | sin | 18 | NA |
| 306 | 161.44 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 329 | 161.57 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 4 |
| 353 | 161.70 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 7 |
| 358 | 161.72 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 410 | 161.94 | temperature | 20 | 1440 | > th | dose dependent | rect. | 14 | 11 |
| 416 | 161.95 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 6 |
| 451 | 162.10 | temperature | 10 | 1440 | > th | dose dependent | sin | 19 | NA |
| 500 | 162.23 | temperature | 20 | 1440 | > th | dose dependent | sin | 4 | NA |
| 664 | 162.92 | temperature | 10 | 270 | > th | dose dependent | rect. | 12 | 15 |
| 780 | 163.32 | temperature | 10 | 270 | > th | dose dependent | sin | 21 | NA |
| 784 | 163.33 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 838 | 163.50 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 23 |