Os07g0682300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0682300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 166.88 | 0.607 | 6.91 | 0.293 | 0.746 | 1.05 | -1.45 | -0.376 | -0.19 | 13.2 | 85 | 285 | -- | -- |
| 167.19 | 0.602 | 6.91 | 0.293 | 0.716 | 1.02 | -1.42 | -- | -0.19 | 13.1 | 85 | 301 | -- | -- |
| 173.99 | 0.614 | 6.92 | 0.241 | 0.777 | 1.15 | -- | 0.0157 | -0.19 | 13.8 | 85 | 301 | -- | -- |
| 173.85 | 0.614 | 6.91 | 0.192 | 0.792 | 1.21 | -- | -- | -0.177 | 14 | 85 | 308 | -- | -- |
| 198.02 | 0.655 | 6.93 | 0.294 | -- | 1.02 | -- | -0.475 | -0.199 | -- | 84.38 | 521 | -- | -- |
| 195.84 | 0.656 | 6.94 | 0.443 | 0.611 | -- | -1.71 | -- | -0.352 | 10.5 | -- | -- | -- | -- |
| 207.65 | 0.675 | 6.94 | 0.371 | 0.628 | -- | -- | -- | -0.359 | 10.1 | -- | -- | -- | -- |
| 197.36 | 0.654 | 6.94 | 0.338 | -- | 1.1 | -- | -- | -0.284 | -- | 70.87 | 905 | -- | -- |
| 174.88 | 0.616 | 6.92 | -- | 0.8 | 1.24 | -- | -- | -0.191 | 14 | 85 | 308 | -- | -- |
| 231.5 | 0.711 | 6.96 | 0.363 | -- | -- | -- | -- | -0.36 | -- | -- | -- | -- | -- |
| 211.29 | 0.68 | 6.95 | -- | 0.626 | -- | -- | -- | -0.4 | 10.1 | -- | -- | -- | -- |
| 200.06 | 0.659 | 6.93 | -- | -- | 1.05 | -- | -- | -0.235 | -- | 83.88 | 512 | -- | -- |
| 234.97 | 0.715 | 6.97 | -- | -- | -- | -- | -- | -0.4 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 153.57 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 4 | 19 |
| 2 | 153.59 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 4 | 15 |
| 4 | 155.49 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 4 | 17 |
| 6 | 155.72 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 4 | 7 |
| 11 | 156.38 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 4 | 21 |
| 18 | 156.94 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 4 | 11 |
| 20 | 157.30 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 5 | 15 |
| 26 | 157.60 | wind | 3.0 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 35 | 158.52 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 5 | 17 |
| 36 | 158.57 | wind | 3.0 | 90 | < th | dose dependent | rect. | 4 | 5 |
| 37 | 158.62 | humidity | 90.0 | 270 | < th | dose independent | rect. | 22 | 16 |
| 39 | 158.91 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 5 | 11 |
| 46 | 159.18 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 5 | 6 |
| 51 | 159.33 | wind | 3.0 | 90 | < th | dose dependent | rect. | 4 | 7 |
| 63 | 159.58 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 2 | 21 |
| 68 | 159.82 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 5 | 9 |
| 71 | 159.86 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 102 | 160.61 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 23 |
| 104 | 160.61 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 23 |
| 108 | 160.68 | humidity | 80.0 | 10 | > th | dose independent | rect. | 5 | 5 |
| 112 | 160.78 | humidity | 90.0 | 270 | < th | dose independent | rect. | 19 | 20 |
| 125 | 161.12 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 9 |
| 126 | 161.12 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 9 |
| 136 | 161.25 | humidity | 90.0 | 90 | > th | dose independent | rect. | 4 | 19 |
| 137 | 161.26 | humidity | 80.0 | 90 | > th | dose independent | rect. | 4 | 7 |
| 140 | 161.33 | humidity | 90.0 | 270 | < th | dose independent | rect. | 17 | 22 |
| 155 | 161.44 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 4 | 5 |
| 163 | 161.50 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 7 | 21 |
| 164 | 161.50 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 7 | 21 |
| 166 | 161.56 | humidity | 80.0 | 90 | > th | dose independent | rect. | 4 | 5 |
| 169 | 161.67 | wind | 9.0 | 90 | < th | dose dependent | rect. | 4 | 15 |
| 176 | 161.75 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 4 | 7 |
| 185 | 162.01 | temperature | 15.0 | 90 | > th | dose independent | rect. | 7 | 21 |
| 198 | 162.17 | humidity | 80.0 | 90 | > th | dose independent | rect. | 4 | 11 |
| 214 | 162.48 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 4 | 9 |
| 223 | 162.62 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 4 | 15 |
| 225 | 162.63 | temperature | 20.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 226 | 162.63 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 232 | 162.71 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 4 | 15 |
| 246 | 162.85 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 4 | 3 |
| 248 | 162.86 | wind | 3.0 | 90 | < th | dose independent | rect. | 4 | 3 |
| 250 | 162.89 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 253 | 162.93 | temperature | 15.0 | 90 | > th | dose independent | rect. | 19 | 9 |
| 254 | 162.94 | wind | 9.0 | 90 | < th | dose independent | rect. | 4 | 15 |
| 257 | 162.95 | humidity | 80.0 | 90 | > th | dose independent | rect. | 4 | 15 |
| 263 | 163.07 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 17 |
| 281 | 163.21 | humidity | 90.0 | 90 | > th | dose independent | rect. | 4 | 17 |
| 289 | 163.27 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 292 | 163.30 | temperature | 20.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 300 | 163.38 | wind | 7.0 | 10 | < th | dose dependent | rect. | 5 | 3 |
| 308 | 163.42 | wind | 7.0 | 90 | < th | dose independent | rect. | 19 | 9 |
| 314 | 163.53 | wind | 3.0 | 90 | < th | dose independent | rect. | 4 | 5 |
| 327 | 163.65 | temperature | 30.0 | 90 | < th | dose independent | rect. | 19 | 9 |
| 328 | 163.65 | humidity | 50.0 | 90 | > th | dose independent | rect. | 19 | 9 |
| 330 | 163.65 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 19 | 9 |
| 331 | 163.65 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 9 |
| 336 | 163.65 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 15 |
| 337 | 163.65 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 4 | 15 |
| 338 | 163.65 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 19 | 9 |
| 344 | 163.66 | humidity | 80.0 | 10 | > th | dose independent | rect. | 5 | 11 |
| 346 | 163.68 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 348 | 163.68 | temperature | 30.0 | 90 | < th | dose independent | rect. | 4 | 3 |
| 349 | 163.68 | humidity | 50.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 353 | 163.68 | radiation | 40.0 | 90 | < th | dose independent | rect. | 4 | 3 |
| 357 | 163.70 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 3 |
| 359 | 163.70 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 400 | 164.02 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 15 |
| 407 | 164.09 | temperature | 15.0 | 10 | > th | dose independent | rect. | 8 | 21 |
| 421 | 164.21 | humidity | 90.0 | 270 | > th | dose independent | rect. | 2 | 21 |
| 433 | 164.28 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 8 | 21 |
| 435 | 164.28 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 8 | 21 |
| 461 | 164.49 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 4 | 13 |
| 504 | 164.73 | humidity | 80.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 507 | 164.73 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 19 | 19 |
| 508 | 164.75 | wind | 3.0 | 90 | < th | dose dependent | rect. | 4 | 15 |
| 519 | 164.80 | radiation | 1.0 | 10 | < th | dose dependent | sin | 10 | NA |
| 522 | 164.82 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 528 | 164.86 | wind | 9.0 | 90 | < th | dose independent | rect. | 7 | 21 |
| 531 | 164.87 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 3 |
| 537 | 164.95 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 15 |
| 539 | 164.95 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 15 |
| 540 | 164.95 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 4 | 19 |
| 542 | 164.96 | wind | 3.0 | 90 | < th | dose dependent | rect. | 4 | 17 |
| 558 | 165.12 | humidity | 90.0 | 270 | < th | dose independent | sin | 7 | NA |
| 570 | 165.17 | wind | 5.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 573 | 165.18 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 588 | 165.31 | radiation | 10.0 | 90 | < th | dose independent | rect. | 4 | 5 |
| 602 | 165.38 | wind | 3.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 605 | 165.39 | wind | 7.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 606 | 165.39 | humidity | 90.0 | 10 | > th | dose independent | rect. | 5 | 17 |
| 632 | 165.59 | humidity | 90.0 | 30 | > th | dose dependent | sin | 22 | NA |
| 646 | 165.65 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 648 | 165.65 | temperature | 30.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 649 | 165.65 | humidity | 50.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 652 | 165.65 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 655 | 165.67 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 3 |
| 656 | 165.67 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 3 |
| 657 | 165.67 | wind | 3.0 | 90 | < th | dose dependent | rect. | 4 | 19 |
| 660 | 165.68 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 662 | 165.68 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 663 | 165.68 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 667 | 165.68 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 669 | 165.68 | radiation | 20.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 672 | 165.68 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 23 |
| 674 | 165.70 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 676 | 165.71 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 2 | 8 |
| 679 | 165.73 | wind | 3.0 | 90 | < th | dose independent | rect. | 4 | 7 |
| 681 | 165.73 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 710 | 165.92 | radiation | 1.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 718 | 165.97 | radiation | 10.0 | 10 | < th | dose independent | rect. | 5 | 19 |
| 722 | 166.01 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 1 |
| 723 | 166.01 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 746 | 166.15 | wind | 9.0 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 747 | 166.15 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 750 | 166.15 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 752 | 166.15 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 753 | 166.15 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 754 | 166.15 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 20 |
| 766 | 166.21 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 22 |
| 769 | 166.24 | radiation | 40.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 777 | 166.29 | wind | 9.0 | 10 | < th | dose independent | rect. | 8 | 21 |
| 803 | 166.44 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 816 | 166.50 | radiation | 10.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 828 | 166.53 | radiation | 10.0 | 10 | < th | dose independent | rect. | 5 | 17 |
| 841 | 166.59 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 7 | 21 |
| 870 | 166.71 | humidity | 90.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 878 | 166.73 | radiation | 10.0 | 10 | < th | dose independent | rect. | 5 | 15 |
| 882 | 166.74 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 2 | 12 |
| 938 | 166.95 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 10 |
| 953 | 166.99 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 15 | 16 |
| 970 | 167.06 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 9 |
| 981 | 167.09 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 984 | 167.10 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 16 |