Os07g0682000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heavy metal transport/detoxification protein domain containing protein.
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Os07g0682000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Heavy metal transport/detoxification protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 225.36 | 0.705 | 5.63 | -0.194 | 1.73 | 1.16 | -0.425 | -0.487 | -0.686 | 9.5 | 22.22 | 1921 | -- | -- |
| 226.07 | 0.7 | 5.64 | -0.289 | 1.7 | 1.18 | -0.385 | -- | -0.692 | 9.47 | 22.3 | 1947 | -- | -- |
| 225.91 | 0.7 | 5.63 | -0.182 | 1.73 | 1.16 | -- | -0.561 | -0.679 | 9.48 | 22.2 | 1960 | -- | -- |
| 226.71 | 0.701 | 5.64 | -0.339 | 1.72 | 1.19 | -- | -- | -0.691 | 9.48 | 22.3 | 1943 | -- | -- |
| 334.19 | 0.851 | 5.65 | -0.0283 | -- | 1.69 | -- | -1.08 | -0.552 | -- | 25.11 | 687 | -- | -- |
| 275.67 | 0.778 | 5.74 | -0.816 | 1.79 | -- | -0.472 | -- | -1.13 | 9.52 | -- | -- | -- | -- |
| 276.49 | 0.779 | 5.74 | -0.834 | 1.79 | -- | -- | -- | -1.13 | 9.5 | -- | -- | -- | -- |
| 338.14 | 0.856 | 5.65 | -0.347 | -- | 1.65 | -- | -- | -0.52 | -- | 25.1 | 717 | -- | -- |
| 229.72 | 0.706 | 5.64 | -- | 1.73 | 1.27 | -- | -- | -0.662 | 9.51 | 22.19 | 1944 | -- | -- |
| 465.14 | 1.01 | 5.79 | -0.846 | -- | -- | -- | -- | -1.13 | -- | -- | -- | -- | -- |
| 294.83 | 0.803 | 5.72 | -- | 1.79 | -- | -- | -- | -1.04 | 9.54 | -- | -- | -- | -- |
| 341.23 | 0.86 | 5.64 | -- | -- | 1.71 | -- | -- | -0.463 | -- | 25.14 | 717 | -- | -- |
| 484.04 | 1.03 | 5.77 | -- | -- | -- | -- | -- | -1.03 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 218.16 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 24 | 22 |
| 3 | 220.12 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 21 |
| 7 | 220.63 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 10 | 221.08 | temperature | 10.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 11 | 221.11 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 34 | 223.24 | temperature | 30.0 | 270 | < th | dose dependent | sin | 8 | NA |
| 38 | 223.67 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 45 | 224.12 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 62 | 224.83 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 15 | 19 |
| 71 | 225.20 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 75 | 225.39 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 11 | 22 |
| 95 | 226.21 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 22 | 15 |
| 111 | 226.79 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 22 | 13 |
| 124 | 227.12 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 139 | 227.45 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 5 |
| 143 | 227.60 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 155 | 227.82 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 18 |
| 166 | 227.97 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 170 | 228.07 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 177 | 228.20 | temperature | 30.0 | 270 | < th | dose dependent | no | NA | NA |
| 192 | 228.63 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 2 |
| 193 | 228.64 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 2 |
| 194 | 228.64 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 2 |
| 195 | 228.65 | temperature | 10.0 | 90 | > th | dose dependent | no | NA | NA |
| 200 | 228.71 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 209 | 228.87 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 214 | 228.93 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 16 | 5 |
| 220 | 229.06 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 250 | 229.45 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 255 | 229.47 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 15 | 19 |
| 267 | 229.61 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 435 | 231.28 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 16 | NA |
| 499 | 231.75 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 502 | 231.76 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 511 | 231.79 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 650 | 232.48 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 4 | 22 |
| 657 | 232.51 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 658 | 232.51 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 24 | 2 |
| 682 | 232.57 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 10 |
| 715 | 232.69 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 722 | 232.70 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 24 | 23 |
| 792 | 232.94 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 19 | 15 |
| 821 | 233.03 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 882 | 233.24 | temperature | 10.0 | 720 | > th | dose dependent | sin | 12 | NA |
| 926 | 233.40 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 951 | 233.48 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 21 | 5 |