Os07g0681500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ankyrin repeat containing protein.
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Os07g0681500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ankyrin repeat containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42.4 | 0.306 | 9.2 | 1.6 | 0.651 | -0.15 | 0.0425 | -0.918 | 0.524 | 9.72 | 24.66 | 216 | -- | -- |
| 45.23 | 0.313 | 9.24 | 1.32 | 0.659 | -0.214 | 0.125 | -- | 0.411 | 9.48 | 24.9 | 211 | -- | -- |
| 42.4 | 0.303 | 9.2 | 1.6 | 0.651 | -0.15 | -- | -0.919 | 0.524 | 9.72 | 24.67 | 216 | -- | -- |
| 45.2 | 0.313 | 9.23 | 1.31 | 0.662 | -0.206 | -- | -- | 0.417 | 9.6 | 24.72 | 210 | -- | -- |
| 65.62 | 0.379 | 9.24 | 1.46 | -- | -0.231 | -- | -0.471 | 0.444 | -- | 24.9 | 32 | -- | -- |
| 47.51 | 0.323 | 9.21 | 1.38 | 0.637 | -- | 0.14 | -- | 0.527 | 10.4 | -- | -- | -- | -- |
| 47.59 | 0.323 | 9.21 | 1.38 | 0.637 | -- | -- | -- | 0.527 | 10.4 | -- | -- | -- | -- |
| 66.71 | 0.382 | 9.25 | 1.32 | -- | -0.246 | -- | -- | 0.4 | -- | 24.8 | 25 | -- | -- |
| 88.69 | 0.439 | 9.28 | -- | 0.69 | -0.389 | -- | -- | 0.186 | 8.82 | 24.79 | 230 | -- | -- |
| 72.39 | 0.398 | 9.23 | 1.37 | -- | -- | -- | -- | 0.525 | -- | -- | -- | -- | -- |
| 97.87 | 0.463 | 9.24 | -- | 0.63 | -- | -- | -- | 0.373 | 10.2 | -- | -- | -- | -- |
| 108.35 | 0.486 | 9.29 | -- | -- | -0.426 | -- | -- | 0.243 | -- | 22.7 | 101 | -- | -- |
| 121.97 | 0.515 | 9.26 | -- | -- | -- | -- | -- | 0.373 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.57 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 9 | 4 |
| 2 | 38.81 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 11 | 2 |
| 5 | 38.89 | wind | 1.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 6 | 38.90 | temperature | 30.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 20 | 38.94 | wind | 1.0 | 43200 | < th | dose independent | rect. | 9 | 4 |
| 21 | 39.02 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 24 | 2 |
| 23 | 39.11 | temperature | 30.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 39 | 39.17 | wind | 1.0 | 43200 | > th | dose independent | rect. | 9 | 4 |
| 40 | 39.20 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 2 | 7 |
| 48 | 39.26 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 19 | 14 |
| 51 | 39.28 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 55 | 39.35 | wind | 1.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 61 | 39.48 | wind | 1.0 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 62 | 39.49 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 63 | 39.58 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 20 | 8 |
| 67 | 39.68 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 4 |
| 68 | 39.72 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 81 | 39.86 | wind | 1.0 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 88 | 39.91 | wind | 3.0 | 14400 | < th | dose independent | rect. | 17 | 13 |
| 93 | 39.94 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 9 | 20 |
| 117 | 40.10 | wind | 3.0 | 43200 | < th | dose independent | rect. | 12 | 18 |
| 124 | 40.13 | wind | 3.0 | 14400 | > th | dose independent | rect. | 17 | 13 |
| 129 | 40.14 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 3 |
| 136 | 40.17 | wind | 3.0 | 43200 | > th | dose independent | rect. | 12 | 18 |
| 145 | 40.19 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 159 | 40.22 | wind | 3.0 | 43200 | < th | dose dependent | sin | 13 | NA |
| 173 | 40.24 | wind | 1.0 | 43200 | < th | dose independent | rect. | 23 | 3 |
| 185 | 40.26 | wind | 1.0 | 43200 | > th | dose independent | rect. | 23 | 3 |
| 186 | 40.26 | wind | 1.0 | 43200 | < th | dose independent | rect. | 19 | 7 |
| 187 | 40.26 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 2 | 2 |
| 222 | 40.31 | wind | 1.0 | 43200 | > th | dose independent | rect. | 8 | 9 |
| 223 | 40.31 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 1 | 4 |
| 263 | 40.39 | wind | 3.0 | 14400 | < th | dose independent | rect. | 17 | 21 |
| 265 | 40.40 | wind | 3.0 | 43200 | < th | dose independent | sin | 15 | NA |
| 278 | 40.42 | wind | 7.0 | 43200 | < th | dose independent | rect. | 15 | 2 |
| 295 | 40.43 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 8 | 14 |
| 305 | 40.44 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 17 | 20 |
| 308 | 40.45 | wind | 1.0 | 43200 | < th | dose independent | rect. | 21 | 5 |
| 314 | 40.46 | wind | 3.0 | 14400 | < th | dose independent | sin | 13 | NA |
| 324 | 40.47 | wind | 1.0 | 43200 | < th | dose independent | rect. | 8 | 9 |
| 332 | 40.47 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 20 | 21 |
| 333 | 40.47 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 18 | 23 |
| 351 | 40.50 | wind | 3.0 | 43200 | > th | dose independent | sin | 15 | NA |
| 387 | 40.53 | wind | 3.0 | 43200 | < th | dose dependent | no | NA | NA |
| 388 | 40.53 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 3 |
| 408 | 40.55 | wind | 3.0 | 14400 | > th | dose independent | rect. | 17 | 21 |
| 409 | 40.55 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 417 | 40.56 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 20 | 20 |
| 418 | 40.56 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 15 | 23 |
| 472 | 40.61 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 492 | 40.62 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 13 | 23 |
| 494 | 40.62 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 23 |
| 495 | 40.63 | wind | 7.0 | 43200 | > th | dose independent | rect. | 15 | 2 |
| 506 | 40.64 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 555 | 40.67 | wind | 3.0 | 43200 | < th | dose independent | sin | 22 | NA |
| 583 | 40.69 | wind | 1.0 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 635 | 40.73 | wind | 3.0 | 43200 | > th | dose independent | sin | 22 | NA |
| 671 | 40.75 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 22 |
| 699 | 40.77 | wind | 1.0 | 43200 | < th | dose independent | rect. | 8 | 14 |
| 701 | 40.77 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 16 |
| 703 | 40.77 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 716 | 40.78 | wind | 3.0 | 14400 | > th | dose independent | sin | 12 | NA |
| 763 | 40.80 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 776 | 40.81 | wind | 1.0 | 43200 | > th | dose independent | rect. | 19 | 7 |
| 796 | 40.82 | wind | 3.0 | 43200 | > th | dose independent | rect. | 9 | 12 |
| 799 | 40.82 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 16 |
| 802 | 40.82 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 20 |
| 863 | 40.84 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 22 |
| 908 | 40.86 | wind | 3.0 | 43200 | < th | dose dependent | sin | 23 | NA |
| 923 | 40.87 | temperature | 25.0 | 270 | < th | dose independent | rect. | 23 | 15 |
| 940 | 40.88 | wind | 1.0 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 953 | 40.88 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 20 |
| 985 | 40.90 | wind | 1.0 | 43200 | > th | dose independent | rect. | 21 | 5 |