Os07g0681300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os07g0681300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 390.25 | 0.928 | 4.37 | -0.751 | 1.54 | -1.71 | -1.88 | 5.13 | 0.19 | 18.1 | 20.9 | 3874 | -- | -- |
| 409.49 | 0.942 | 4.48 | -0.79 | 1.55 | -2.87 | -2.41 | -- | 0.347 | 17.9 | 21.4 | 14111 | -- | -- |
| 397.62 | 0.929 | 4.36 | -0.636 | 1.53 | -1.71 | -- | 5.25 | 0.235 | 18.1 | 21.13 | 4008 | -- | -- |
| 400.64 | 0.932 | 4.48 | -0.0719 | 1.56 | -3.35 | -- | -- | 0.382 | 18 | 19.7 | 21361 | -- | -- |
| 517.78 | 1.06 | 4.33 | -0.64 | -- | -1.78 | -- | 5.23 | 0.222 | -- | 21.16 | 4068 | -- | -- |
| 553.98 | 1.1 | 4.74 | -3.25 | 1.58 | -- | -2.15 | -- | -0.791 | 17.8 | -- | -- | -- | -- |
| 565.3 | 1.11 | 4.75 | -3.24 | 1.57 | -- | -- | -- | -0.8 | 17.8 | -- | -- | -- | -- |
| 524.79 | 1.07 | 4.45 | 0.0114 | -- | -3.44 | -- | -- | 0.373 | -- | 19.75 | 21432 | -- | -- |
| 400.54 | 0.932 | 4.48 | -- | 1.54 | -3.39 | -- | -- | 0.386 | 18 | 19.7 | 21361 | -- | -- |
| 692.69 | 1.23 | 4.72 | -3.28 | -- | -- | -- | -- | -0.837 | -- | -- | -- | -- | -- |
| 841.21 | 1.36 | 4.67 | -- | 1.62 | -- | -- | -- | -0.44 | 17.7 | -- | -- | -- | -- |
| 524.79 | 1.07 | 4.45 | -- | -- | -3.43 | -- | -- | 0.374 | -- | 19.72 | 21432 | -- | -- |
| 977.06 | 1.46 | 4.64 | -- | -- | -- | -- | -- | -0.472 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 340.32 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 17 |
| 5 | 341.31 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 24 | 21 |
| 16 | 342.56 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 2 | NA |
| 31 | 344.48 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 11 | 23 |
| 34 | 344.71 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 23 |
| 36 | 344.84 | humidity | 90.0 | 14400 | > th | dose dependent | no | NA | NA |
| 37 | 344.84 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 23 |
| 41 | 345.01 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 23 |
| 62 | 345.48 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 23 |
| 90 | 346.80 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 11 | 17 |
| 102 | 347.21 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 19 |
| 146 | 349.32 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 5 |
| 149 | 349.62 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 21 |
| 170 | 350.49 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 12 | 20 |
| 194 | 351.23 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 15 | NA |
| 224 | 352.01 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 12 | 16 |
| 265 | 353.11 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 23 |
| 275 | 353.34 | humidity | 90.0 | 14400 | > th | dose independent | no | NA | NA |
| 291 | 353.71 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 15 | 23 |
| 315 | 354.22 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 2 | 23 |
| 324 | 354.37 | humidity | 90.0 | 14400 | > th | dose independent | sin | 5 | NA |
| 450 | 358.09 | humidity | 90.0 | 14400 | > th | dose independent | sin | 14 | NA |
| 453 | 358.27 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 2 | 9 |
| 572 | 363.34 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 24 | 19 |
| 575 | 363.51 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 583 | 363.80 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 609 | 365.25 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 22 |
| 630 | 365.91 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 22 | 3 |
| 655 | 366.96 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 12 | 22 |
| 686 | 367.71 | humidity | 90.0 | 14400 | < th | dose independent | no | NA | NA |
| 695 | 367.90 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 8 | 23 |
| 704 | 368.03 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 16 | 23 |
| 713 | 368.12 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 11 | 17 |
| 714 | 368.15 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 2 | 23 |
| 740 | 368.85 | humidity | 90.0 | 14400 | < th | dose independent | sin | 4 | NA |
| 900 | 373.07 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 924 | 373.66 | humidity | 90.0 | 14400 | < th | dose independent | sin | 15 | NA |
| 945 | 374.24 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 953 | 374.45 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 967 | 374.83 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 971 | 374.95 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 22 | 2 |
| 989 | 375.24 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 990 | 375.24 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 1 |