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Os07g0678300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to OsPK4.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.7 (0.0283) R2 : 0.637
β1 : -1.15 (0.103) R2dD : 0.104 R2D : 0.0881
β2 : 3.45 (0.172) R2dC : 2.15 R2C : -2.7
β3 : 3.8 (0.154) R2dE : 3.25 R2E : -1.63
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.132 (0.0603) R2dN8 : 0.00522 R2N8 : 0.00407
σ : 0.524
deviance : 126.47
__
_____
C
peak time of C : 12.5
E
wheather : radiation
threshold : 1.101
memory length : 81
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 4.4
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
113.66 0.501 13.7 -1.03 3.55 3.87 -2.88 -1.18 -0.115 12.4 1.297 79 4.59 --
114.18 0.498 13.7 -1.08 3.41 3.77 -1.7 -- -0.116 12.5 1.073 82 4.45 --
116.66 0.503 13.7 -1.14 3.59 3.93 -- 1.42 -0.127 12.5 1.267 81 4.45 --
126.47 0.524 13.7 -1.15 3.45 3.8 -- -- -0.132 12.5 1.101 81 4.4 --
249.89 0.74 13.8 -1.18 -- 0.781 -- 1.3 -0.324 -- 1.267 81 4.45 --
258.57 0.754 13.8 -1.19 0.874 -- 1.55 -- -0.342 3.74 -- -- -- --
264.63 0.762 13.8 -1.21 0.906 -- -- -- -0.351 4.34 -- -- -- --
223.9 0.697 13.9 -1.41 -- 1.07 -- -- -0.409 -- 0.7007 110 2.32 --
161.27 0.591 13.7 -- 3.57 3.87 -- -- -0.012 12.4 1.076 79 4.51 --
308.8 0.821 13.8 -1.17 -- -- -- -- -0.327 -- -- -- -- --
303.19 0.815 13.8 -- 0.883 -- -- -- -0.216 4.37 -- -- -- --
240.01 0.722 13.8 -- -- 1.49 -- -- -0.202 -- 0.7586 47 0.168 --
345.14 0.867 13.8 -- -- -- -- -- -0.197 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 115.71 radiation 1.0 90 < th dose dependent sin 11 NA
3 118.64 radiation 1.0 90 < th dose independent sin 11 NA
5 129.88 radiation 1.0 90 > th dose independent sin 11 NA
13 138.25 radiation 10.0 270 < th dose independent rect. 5 1
14 138.27 temperature 10.0 270 > th dose dependent rect. 5 1
21 140.03 temperature 10.0 270 > th dose dependent rect. 4 3
24 142.29 radiation 10.0 270 < th dose independent rect. 4 3
26 144.21 radiation 40.0 90 < th dose independent rect. 5 4
27 144.21 temperature 10.0 270 > th dose dependent rect. 3 5
28 144.62 radiation 20.0 270 < th dose independent rect. 3 5
31 145.04 radiation 1.0 90 > th dose independent rect. 18 15
34 145.37 humidity 60.0 90 > th dose independent rect. 5 4
36 145.62 precipitation 0.1 90 < th dose independent rect. 5 4
37 145.62 precipitation 0.1 90 < th dose dependent rect. 5 4
39 145.71 wind 9.0 90 < th dose dependent rect. 5 4
43 146.12 wind 9.0 90 < th dose independent rect. 5 4
44 146.12 temperature 10.0 90 > th dose independent rect. 5 4
47 146.12 atmosphere 995.0 90 > th dose independent rect. 5 4
48 146.12 atmosphere 1015.0 90 < th dose independent rect. 5 4
49 146.12 temperature 10.0 90 > th dose independent rect. 9 20
53 146.49 humidity 50.0 90 > th dose dependent rect. 5 4
56 146.85 temperature 30.0 90 < th dose independent rect. 5 4
63 147.77 humidity 70.0 270 > th dose independent rect. 3 5
65 147.97 precipitation 0.1 270 < th dose independent rect. 3 5
66 147.97 precipitation 0.1 270 < th dose dependent rect. 3 5
79 148.07 temperature 10.0 270 > th dose independent rect. 7 21
82 148.12 radiation 20.0 270 < th dose dependent rect. 5 1
83 148.22 radiation 40.0 270 < th dose dependent rect. 4 3
87 148.50 atmosphere 1010.0 270 < th dose independent rect. 5 1
90 148.75 radiation 1.0 90 > th dose independent rect. 4 5
100 148.85 precipitation 0.1 270 < th dose independent rect. 5 1
101 148.85 precipitation 0.1 270 < th dose dependent rect. 5 1
103 149.00 wind 9.0 90 < th dose independent rect. 9 20
109 149.48 wind 7.0 270 < th dose independent rect. 5 1
111 149.48 temperature 10.0 270 > th dose independent rect. 5 1
113 149.48 temperature 30.0 270 < th dose independent rect. 5 1
114 149.48 humidity 50.0 270 > th dose independent rect. 5 1
117 149.48 atmosphere 995.0 270 > th dose independent rect. 5 1
122 149.48 temperature 10.0 270 > th dose independent rect. 6 23
131 149.80 radiation 1.0 270 < th dose dependent rect. 18 10
132 150.00 humidity 50.0 270 > th dose dependent rect. 5 1
134 150.42 wind 9.0 270 < th dose dependent rect. 5 1
138 150.68 wind 7.0 270 < th dose independent rect. 3 5
141 150.79 temperature 10.0 270 > th dose independent rect. 3 5
143 150.79 temperature 30.0 270 < th dose independent rect. 3 5
144 150.79 humidity 50.0 270 > th dose independent rect. 3 5
146 150.79 atmosphere 995.0 270 > th dose independent rect. 3 5
147 150.79 atmosphere 1015.0 270 < th dose independent rect. 3 5
149 150.79 radiation 40.0 270 < th dose dependent rect. 3 5
152 150.96 radiation 40.0 90 < th dose independent rect. 5 6
159 151.49 radiation 1.0 270 < th dose independent rect. 18 10
161 151.67 wind 9.0 270 < th dose independent rect. 7 21
162 151.70 humidity 50.0 90 > th dose dependent rect. 19 10
163 151.98 temperature 30.0 270 < th dose independent rect. 18 10
167 152.23 humidity 60.0 270 > th dose independent rect. 18 10
175 152.75 humidity 50.0 270 > th dose dependent rect. 3 5
181 152.98 humidity 50.0 90 > th dose dependent rect. 5 6
182 153.05 precipitation 0.1 270 < th dose independent rect. 14 18
183 153.05 precipitation 0.1 270 < th dose dependent rect. 14 18
190 153.22 atmosphere 995.0 270 > th dose independent rect. 18 10
194 153.43 radiation 1.0 270 > th dose independent rect. 8 6
196 153.50 precipitation 0.1 270 < th dose independent rect. 4 14
197 153.50 precipitation 0.1 270 < th dose dependent rect. 4 14
199 153.56 radiation 40.0 90 < th dose dependent rect. 5 6
218 154.33 wind 9.0 270 < th dose independent rect. 18 10
219 154.35 temperature 10.0 270 > th dose independent rect. 18 10
224 154.35 temperature 10.0 270 > th dose independent rect. 4 14
225 154.35 atmosphere 1015.0 270 < th dose independent rect. 4 14
232 154.65 radiation 1.0 90 < th dose dependent rect. 21 9
235 154.75 precipitation 0.1 90 < th dose independent rect. 5 16
236 154.75 precipitation 0.1 90 < th dose dependent rect. 5 16
237 154.94 wind 9.0 270 < th dose independent rect. 4 14
242 155.06 radiation 1.0 270 > th dose independent rect. 18 12
264 155.40 temperature 15.0 270 > th dose independent rect. 8 6
266 155.45 wind 9.0 270 < th dose dependent rect. 3 5
272 155.51 precipitation 0.1 270 < th dose independent rect. 15 16
273 155.51 precipitation 0.1 270 < th dose dependent rect. 15 16
287 155.57 precipitation 0.1 90 < th dose independent rect. 9 20
288 155.57 precipitation 0.1 90 < th dose dependent rect. 9 20
291 155.78 atmosphere 995.0 90 > th dose independent rect. 9 20
296 156.05 wind 9.0 270 < th dose independent rect. 14 18
304 156.42 wind 9.0 90 < th dose independent rect. 21 8
306 156.45 temperature 10.0 90 > th dose independent rect. 21 8
307 156.45 temperature 30.0 90 < th dose independent rect. 21 8
308 156.45 humidity 50.0 90 > th dose independent rect. 21 8
311 156.45 atmosphere 995.0 90 > th dose independent rect. 21 8
312 156.45 radiation 20.0 90 < th dose independent rect. 21 8
315 156.45 temperature 10.0 90 > th dose independent rect. 5 16
316 156.45 atmosphere 1015.0 90 < th dose independent rect. 5 16
317 156.46 radiation 40.0 90 < th dose dependent rect. 21 8
321 156.52 precipitation 0.1 270 < th dose independent rect. 8 6
322 156.52 precipitation 0.1 270 < th dose dependent rect. 8 6
323 156.59 radiation 1.0 90 < th dose independent rect. 21 8
338 156.71 atmosphere 995.0 270 > th dose independent rect. 8 6
339 156.71 atmosphere 1015.0 270 < th dose independent rect. 8 6
340 156.71 temperature 10.0 270 > th dose independent rect. 14 18
343 156.76 radiation 40.0 270 < th dose independent rect. 14 18
351 156.97 wind 9.0 270 < th dose independent rect. 8 6
358 157.21 humidity 50.0 270 > th dose independent rect. 8 19
371 157.29 radiation 1.0 90 < th dose dependent rect. 21 13
374 157.38 humidity 50.0 270 > th dose independent rect. 7 21
388 157.56 radiation 1.0 90 < th dose dependent rect. 19 15
389 157.62 wind 9.0 90 < th dose independent rect. 5 16
425 158.48 radiation 1.0 270 > th dose independent rect. 5 1
430 158.72 wind 9.0 270 < th dose independent rect. 15 16
436 158.88 radiation 40.0 270 < th dose independent rect. 15 16
459 159.28 humidity 50.0 90 > th dose dependent rect. 21 8
461 159.31 precipitation 0.1 90 < th dose independent rect. 21 8
462 159.31 precipitation 0.1 90 < th dose dependent rect. 21 8
464 159.41 precipitation 0.1 270 < th dose independent rect. 7 8
467 159.41 precipitation 0.1 270 < th dose dependent rect. 7 8
480 159.59 precipitation 0.1 270 < th dose independent rect. 7 21
481 159.59 precipitation 0.1 270 < th dose dependent rect. 7 21
485 159.69 wind 1.0 270 > th dose independent rect. 8 6
487 159.69 atmosphere 1015.0 270 < th dose independent rect. 7 8
489 159.69 temperature 10.0 270 > th dose independent rect. 15 16
516 160.30 atmosphere 995.0 270 > th dose independent rect. 7 21
522 160.47 wind 9.0 270 < th dose independent rect. 7 8
570 160.86 humidity 50.0 270 > th dose independent rect. 8 6
576 160.94 precipitation 0.1 90 < th dose independent rect. 19 10
577 160.94 precipitation 0.1 90 < th dose dependent rect. 19 10
598 161.29 atmosphere 1015.0 90 < th dose independent rect. 9 20
600 161.33 atmosphere 995.0 90 > th dose independent rect. 5 14
603 161.40 radiation 20.0 10 < th dose independent rect. 5 19
613 161.53 radiation 40.0 90 < th dose independent rect. 5 16
625 161.75 atmosphere 1015.0 90 < th dose dependent rect. 5 4
643 162.06 atmosphere 995.0 270 > th dose independent rect. 14 18
645 162.09 atmosphere 995.0 90 > th dose independent rect. 5 16
723 163.22 radiation 20.0 10 < th dose independent rect. 5 17
739 163.35 wind 1.0 90 > th dose independent rect. 5 4
768 164.02 wind 9.0 90 < th dose dependent rect. 19 10
785 164.30 radiation 40.0 10 < th dose dependent rect. 5 17
812 164.75 temperature 10.0 270 > th dose independent rect. 13 10
813 164.75 temperature 10.0 270 > th dose independent rect. 23 14
814 164.75 atmosphere 995.0 270 > th dose independent rect. 23 14
818 164.88 radiation 40.0 10 < th dose dependent rect. 5 19
819 164.89 radiation 1.0 90 < th dose dependent rect. 19 22
822 164.94 precipitation 0.1 270 < th dose independent rect. 13 9
824 164.94 precipitation 0.1 270 < th dose dependent rect. 13 9
825 164.95 radiation 1.0 90 < th dose independent rect. 21 13
826 165.01 radiation 10.0 10 < th dose dependent rect. 20 10
874 165.48 atmosphere 995.0 270 > th dose independent rect. 15 16
881 165.54 wind 9.0 270 < th dose independent rect. 13 10
968 166.30 radiation 20.0 10 < th dose independent rect. 5 21