Os07g0676900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Peroxidase (EC 1.11.1.7).
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Os07g0676900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Peroxidase (EC 1.11.1.7).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 443.19 | 0.989 | 9.86 | -2.42 | 3.21 | -0.639 | 0.83 | -6.97 | -0.648 | 0.631 | 9.41 | 1356 | -- | -- |
| 478.1 | 1.02 | 9.64 | -0.682 | 3.17 | -0.935 | 0.443 | -- | -0.169 | 0.623 | 8.12 | 5683 | -- | -- |
| 445.17 | 0.983 | 9.86 | -2.43 | 3.18 | -0.635 | -- | -6.82 | -0.648 | 0.621 | 9.924 | 1503 | -- | -- |
| 474.27 | 1.01 | 9.57 | 0.0243 | 3.18 | -1.27 | -- | -- | 0.13 | 0.617 | 6.614 | 33068 | -- | -- |
| 855.71 | 1.36 | 9.55 | -0.975 | -- | -3.24 | -- | -2.27 | 0.179 | -- | 20.9 | 2 | -- | -- |
| 492.44 | 1.04 | 9.69 | -1.12 | 3.14 | -- | 0.436 | -- | -0.372 | 0.593 | -- | -- | -- | -- |
| 493.25 | 1.04 | 9.69 | -1.14 | 3.14 | -- | -- | -- | -0.375 | 0.6 | -- | -- | -- | -- |
| 852.8 | 1.36 | 9.51 | -0.399 | -- | -3.3 | -- | -- | 0.205 | -- | 21 | 2 | -- | -- |
| 474.26 | 1.01 | 9.57 | -- | 3.19 | -1.24 | -- | -- | 0.133 | 0.606 | 7.193 | 33035 | -- | -- |
| 1112.06 | 1.56 | 9.63 | -1.02 | -- | -- | -- | -- | -0.32 | -- | -- | -- | -- | -- |
| 527.23 | 1.07 | 9.66 | -- | 3.12 | -- | -- | -- | -0.248 | 0.582 | -- | -- | -- | -- |
| 856.73 | 1.37 | 9.5 | -- | -- | -3.42 | -- | -- | 0.257 | -- | 20.97 | 2 | -- | -- |
| 1139.76 | 1.58 | 9.61 | -- | -- | -- | -- | -- | -0.207 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 434.41 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 4 |
| 2 | 436.50 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 7 | 437.35 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 2 |
| 8 | 437.48 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 12 |
| 19 | 438.51 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 7 |
| 20 | 438.51 | radiation | 10 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 26 | 438.72 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 10 |
| 43 | 439.39 | temperature | 15 | 720 | > th | dose dependent | rect. | 13 | 16 |
| 44 | 439.40 | temperature | 15 | 720 | > th | dose dependent | rect. | 13 | 19 |
| 92 | 440.71 | temperature | 15 | 720 | > th | dose dependent | sin | 15 | NA |
| 110 | 440.99 | temperature | 10 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 123 | 441.22 | temperature | 30 | 4320 | < th | dose dependent | rect. | 24 | 1 |
| 145 | 441.47 | temperature | 30 | 4320 | < th | dose dependent | rect. | 22 | 4 |
| 195 | 441.99 | temperature | 30 | 1440 | > th | dose dependent | rect. | 13 | 6 |
| 228 | 442.12 | humidity | 90 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 240 | 442.23 | humidity | 80 | 14400 | > th | dose dependent | rect. | 3 | 4 |
| 278 | 442.44 | temperature | 30 | 1440 | > th | dose dependent | sin | 14 | NA |
| 325 | 442.57 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 12 |
| 414 | 442.79 | temperature | 30 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 442 | 442.90 | temperature | 30 | 4320 | < th | dose dependent | sin | 10 | NA |
| 469 | 442.96 | temperature | 10 | 4320 | > th | dose dependent | sin | 10 | NA |
| 668 | 443.36 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 23 |
| 672 | 443.37 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 725 | 443.46 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 812 | 443.63 | wind | 3 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 822 | 443.66 | humidity | 90 | 14400 | < th | dose independent | rect. | 3 | 4 |
| 846 | 443.70 | temperature | 25 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 919 | 443.85 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 1 |