Os07g0676800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0676800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33.64 | 0.272 | 12.3 | -2 | 0.409 | -60.9 | -0.0274 | -126 | -0.213 | 0.248 | 15.04 | 4858 | -- | -- |
| 35.05 | 0.278 | 13.2 | 0.0353 | 0.412 | -0.97 | -0.0413 | -- | -0.168 | 0.217 | 15.04 | 4858 | -- | -- |
| 33.64 | 0.27 | 12.3 | -1.99 | 0.41 | -60.9 | -- | -126 | -0.211 | 0.226 | 15.04 | 4855 | -- | -- |
| 34.49 | 0.274 | 13.2 | -0.102 | 0.394 | -0.585 | -- | -- | -0.2 | 0.154 | 17.3 | 6098 | -- | -- |
| 43.9 | 0.309 | 12.3 | -1.97 | -- | -60.9 | -- | -126 | -0.209 | -- | 15.05 | 5141 | -- | -- |
| 36.81 | 0.284 | 13.2 | 0.0771 | 0.396 | -- | 0.0739 | -- | -0.158 | 0.204 | -- | -- | -- | -- |
| 36.84 | 0.284 | 13.2 | 0.0741 | 0.396 | -- | -- | -- | -0.159 | 0.218 | -- | -- | -- | -- |
| 43.4 | 0.307 | 13.2 | -0.197 | -- | -0.453 | -- | -- | -0.298 | -- | 31.05 | 11003 | -- | -- |
| 34.7 | 0.274 | 13.2 | -- | 0.397 | -0.534 | -- | -- | -0.191 | 0.204 | 17.1 | 6083 | -- | -- |
| 46.7 | 0.319 | 13.2 | 0.0871 | -- | -- | -- | -- | -0.152 | -- | -- | -- | -- | -- |
| 36.98 | 0.284 | 13.2 | -- | 0.397 | -- | -- | -- | -0.167 | 0.228 | -- | -- | -- | -- |
| 43.45 | 0.307 | 13.2 | -- | -- | -0.381 | -- | -- | -0.226 | -- | 33.45 | 2390 | -- | -- |
| 46.9 | 0.32 | 13.2 | -- | -- | -- | -- | -- | -0.162 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.90 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 4 |
| 4 | 31.93 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 8 |
| 29 | 32.19 | wind | 3 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 32 | 32.22 | humidity | 90 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 45 | 32.32 | humidity | 90 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 46 | 32.32 | humidity | 90 | 14400 | > th | dose dependent | sin | 0 | NA |
| 49 | 32.33 | humidity | 90 | 14400 | > th | dose independent | rect. | 6 | 9 |
| 61 | 32.37 | radiation | 1 | 1440 | > th | dose independent | rect. | 13 | 2 |
| 69 | 32.41 | humidity | 90 | 14400 | < th | dose independent | rect. | 6 | 9 |
| 75 | 32.43 | radiation | 1 | 1440 | > th | dose independent | rect. | 10 | 5 |
| 99 | 32.49 | radiation | 1 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 103 | 32.49 | radiation | 1 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 111 | 32.51 | wind | 3 | 43200 | < th | dose dependent | rect. | 5 | 4 |
| 116 | 32.52 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 4 |
| 121 | 32.52 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 4 |
| 135 | 32.54 | humidity | 90 | 14400 | > th | dose independent | sin | 0 | NA |
| 152 | 32.56 | humidity | 90 | 14400 | > th | dose dependent | rect. | 17 | 3 |
| 201 | 32.63 | humidity | 90 | 14400 | > th | dose dependent | rect. | 13 | 8 |
| 247 | 32.68 | wind | 3 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 289 | 32.72 | humidity | 90 | 14400 | < th | dose independent | sin | 1 | NA |
| 330 | 32.76 | humidity | 90 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 343 | 32.77 | wind | 3 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 364 | 32.78 | humidity | 90 | 14400 | > th | dose independent | rect. | 11 | 9 |
| 402 | 32.80 | wind | 3 | 43200 | < th | dose dependent | rect. | 1 | 7 |
| 482 | 32.86 | humidity | 90 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 484 | 32.86 | humidity | 80 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 491 | 32.86 | humidity | 70 | 14400 | > th | dose dependent | sin | 2 | NA |
| 509 | 32.86 | humidity | 60 | 14400 | > th | dose dependent | rect. | 2 | 15 |
| 512 | 32.87 | humidity | 90 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 628 | 32.91 | humidity | 60 | 14400 | > th | dose dependent | rect. | 11 | 6 |
| 663 | 32.92 | humidity | 60 | 14400 | > th | dose dependent | rect. | 14 | 3 |
| 684 | 32.93 | humidity | 90 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 693 | 32.93 | humidity | 60 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 715 | 32.94 | radiation | 20 | 4320 | > th | dose independent | rect. | 16 | 16 |
| 745 | 32.95 | wind | 3 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 802 | 32.97 | humidity | 90 | 14400 | < th | dose independent | rect. | 11 | 3 |
| 810 | 32.97 | wind | 1 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 837 | 32.98 | humidity | 90 | 14400 | < th | dose independent | rect. | 11 | 7 |
| 850 | 32.98 | wind | 3 | 14400 | < th | dose dependent | rect. | 1 | 4 |
| 878 | 32.99 | humidity | 90 | 14400 | < th | dose independent | rect. | 11 | 9 |
| 909 | 33.00 | humidity | 90 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 989 | 33.02 | humidity | 90 | 14400 | > th | dose dependent | rect. | 13 | 1 |