Os07g0676700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0676700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 159.4 | 0.593 | 3.09 | 0.142 | 0.317 | -0.368 | -0.35 | 1.33 | 0.196 | 21.5 | 62.03 | 136 | -- | -- |
| 163.13 | 0.595 | 3.09 | 0.147 | 0.3 | -0.288 | -0.2 | -- | 0.181 | 21.4 | 62 | 129 | -- | -- |
| 159.11 | 0.587 | 3.1 | 0.14 | 0.31 | -0.401 | -- | 1.5 | 0.196 | 21.5 | 62.24 | 172 | -- | -- |
| 163.05 | 0.599 | 3.09 | 0.173 | 0.336 | -0.27 | -- | -- | 0.182 | 21.5 | 63.86 | 139 | -- | -- |
| 164.73 | 0.598 | 3.09 | 0.137 | -- | -0.412 | -- | 1.44 | 0.195 | -- | 62.07 | 181 | -- | -- |
| 165.76 | 0.604 | 3.1 | 0.166 | 0.318 | -- | -0.143 | -- | 0.142 | 20.3 | -- | -- | -- | -- |
| 165.82 | 0.603 | 3.1 | 0.17 | 0.318 | -- | -- | -- | 0.142 | 20.4 | -- | -- | -- | -- |
| 168.01 | 0.604 | 3.08 | 0.133 | -- | -0.382 | -- | -- | 0.183 | -- | 62.47 | 509 | -- | -- |
| 163.76 | 0.596 | 3.09 | -- | 0.301 | -0.302 | -- | -- | 0.163 | 21.8 | 63.52 | 136 | -- | -- |
| 171.44 | 0.612 | 3.09 | 0.168 | -- | -- | -- | -- | 0.139 | -- | -- | -- | -- | -- |
| 166.59 | 0.604 | 3.1 | -- | 0.317 | -- | -- | -- | 0.123 | 20.5 | -- | -- | -- | -- |
| 167.31 | 0.602 | 3.1 | -- | -- | -0.404 | -- | -- | 0.109 | -- | 70 | 750 | -- | -- |
| 172.19 | 0.612 | 3.09 | -- | -- | -- | -- | -- | 0.12 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 145.15 | humidity | 60 | 30 | < th | dose independent | rect. | 15 | 1 |
| 7 | 146.17 | humidity | 60 | 30 | < th | dose dependent | rect. | 15 | 1 |
| 12 | 147.01 | radiation | 30 | 90 | > th | dose dependent | rect. | 15 | 1 |
| 44 | 147.29 | radiation | 40 | 90 | > th | dose independent | rect. | 15 | 1 |
| 79 | 147.32 | radiation | 20 | 10 | > th | dose independent | rect. | 16 | 1 |
| 206 | 147.86 | wind | 1 | 90 | < th | dose dependent | rect. | 15 | 1 |
| 279 | 148.82 | humidity | 60 | 90 | < th | dose independent | rect. | 14 | 19 |
| 281 | 148.91 | humidity | 60 | 30 | < th | dose dependent | rect. | 12 | 4 |
| 282 | 148.93 | humidity | 60 | 90 | < th | dose independent | sin | 12 | NA |
| 286 | 149.09 | wind | 1 | 90 | < th | dose independent | rect. | 15 | 1 |
| 307 | 149.52 | humidity | 60 | 10 | < th | dose independent | sin | 12 | NA |
| 312 | 149.57 | humidity | 60 | 10 | < th | dose dependent | sin | 12 | NA |
| 335 | 149.87 | humidity | 60 | 90 | < th | dose independent | rect. | 14 | 5 |
| 350 | 149.89 | wind | 3 | 10 | < th | dose dependent | rect. | 16 | 1 |
| 421 | 150.07 | wind | 3 | 10 | < th | dose independent | rect. | 16 | 1 |
| 471 | 150.66 | humidity | 60 | 10 | < th | dose dependent | rect. | 14 | 5 |
| 512 | 150.83 | humidity | 60 | 90 | > th | dose independent | sin | 12 | NA |
| 517 | 150.89 | atmosphere | 1005 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 536 | 151.30 | atmosphere | 1005 | 10 | < th | dose dependent | rect. | 15 | 2 |
| 555 | 151.41 | humidity | 60 | 10 | > th | dose independent | sin | 12 | NA |
| 836 | 153.48 | humidity | 60 | 30 | < th | dose dependent | rect. | 12 | 22 |
| 979 | 155.06 | atmosphere | 1005 | 90 | < th | dose independent | rect. | 14 | 1 |
| 980 | 155.06 | humidity | 60 | 30 | < th | dose dependent | rect. | 12 | 7 |